PROJECT INFORMATION
GOLD Project ID
Gp0004917  
Project Name
Methylorubrum extorquens AM1  
Other Names
  
Legacy ER Project ID
14789  
Legacy GOLD ID
Gi04283  
NCBI BioProject Name Methylobacterium extorquens AM1
NCBI BioProject Accession PRJNA37299
NCBI Locus Tag
CCG  
NCBI BioSample Accession
PI Unknown
Added By Nikos Kyrpides on 2009-04-20
Last Modified By Supratim Mukherjee on 2018-09-24
Project Comments
  
Project Status
incomplete  
Project Relevance Biotechnological
Methanol production
Sequencing Center Broad Institute (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Methylobacterium extorquens AM1 genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Methylobacterium extorquens AM1
Organism Methylorubrum extorquens AM1
Analysis Projects
  
Number of Analysis Projects (AP) 0
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0001592
Organism Name
Methylorubrum extorquens AM1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Methylorubrum  
Genus Synonyms
  
Species
Methylorubrum extorquens  
Subspecies
  
Species Synonyms
  
Strain
AM1  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
ATCC 14718  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 272630
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Hyphomicrobiales  
NCBI Family
Methylobacteriaceae  
NCBI Genus
Methylorubrum  
NCBI Species
Methylorubrum extorquens  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Air  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 122729
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Pairs
Diseases None
Known Habitats Air
Metabolisms
  
Phenotypes
  
Energy Sources Methylotroph

 

 

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