PROJECT INFORMATION | |
---|---|
GOLD Project ID
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Gp0004876
|
Project Name
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Blattabacterium sp. BPLAN
|
Other Names
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|
Legacy ER Project ID
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14726
|
Legacy GOLD ID
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Gi04212, Gc01128
|
NCBI BioProject Name | Blattabacterium sp. (Periplaneta americana) str. BPLAN |
NCBI BioProject ID
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32975 |
NCBI BioProject Accession
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PRJNA32975 |
NCBI Locus Tag
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BPLAN
|
NCBI BioSample Accession
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|
PI | Moran NA |
Added By |
Nikos Kyrpides
on 2009-04-10 |
Last Modified By |
Michelle Isbandi
on 2016-01-26 |
Project Comments |
|
Project Status
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Complete and Published
|
Project Relevance
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Comparative analysis Pest control Biotechnological |
Sequencing Center
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University of Arizona
(USA)
|
Collaborating Institute
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|
Funding Agency
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|
Project Description
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This strain will be used for comparative genome analysis.
|
Is JGI Project |
No
|
Project Information Visibility
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Public |
PROJECT TYPE | |
Specimen
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Organism |
Nucleic Acid
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DNA |
Sequencing Strategy
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Whole Genome Sequencing
|
EXTERNAL PROJECT LINKS | |
Project Information
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|
Database
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|
Genome Publications
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Proceedings of the National Academy of Sciences of the United States of America
106(46):19521-6
Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont.
|
Other Publications
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|
SRA Experiment |
|
PROJECT COMPOSITION | |
Study |
Blattabacterium sp. BPLAN |
Organism |
Blattabacterium sp. BPLAN |
Analysis Projects |
Blattabacterium sp. BPLAN |
Number of Analysis Projects |
1 |
Number of DAPs |
0
|
SEQUENCING INFORMATION | |
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Sequencing Status
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Complete |
Sequencing Quality (MIGS-31) |
Level 6: Finished |
Finishing Goal
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|
Sequencing Comments
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|
Sequencing Technology
(MIGS-29)
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454 GS FLX Sanger |
Library Method
(MIGS-28)
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|
Number Of Reads
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225,047
|
Read Size
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636994 bp
|
Vector
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|
GC Percent |
28
|
Chromosome Count |
1
|
Plasmid Count |
1
|
ORGANISM NAME | |
---|---|
GOLD Organism ID |
Go0004876 |
Organism Name |
Blattabacterium sp. BPLAN
|
Other names (alias, synonyms, short names, common names) |
|
Organism Domain |
BACTERIAL
|
Phylogeny |
BACTEROIDETES
|
Genus |
Blattabacterium
|
Genus Synonyms |
|
Species |
Blattabacterium sp. (Periplaneta americana)
|
Subspecies |
|
Species Synonyms |
|
Strain |
BPLAN
|
Strain Synonyms |
|
Serovar/Cultivar |
|
Culture Collection ID |
|
Type Strain |
Unknown
|
Exemplar DOI |
|
Exemplar Name |
|
Taxon DOI |
|
Biosafety Level |
|
Organism Comments |
|
Cultured |
Yes
|
Culture Type |
Isolate
|
Organism Type |
Natural
|
Uncultured Type |
|
Commercial Strain |
|
Commercial Strain Comments |
|
ORGANISM TAXONOMY
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|
NCBI Taxonomy ID |
600809 |
NCBI Superkingdom |
Bacteria
|
NCBI Kingdom |
|
NCBI Phylum |
Bacteroidetes
|
NCBI Class |
Flavobacteriia
|
NCBI Order |
Flavobacteriales
|
NCBI Family |
Blattabacteriaceae
|
NCBI Genus |
Blattabacterium
|
NCBI Species |
Blattabacterium sp. (Periplaneta americana)
|
ISOLATION CLASSIFICATION | |
Ecosystem |
Host-associated
|
Ecosystem Category |
Insecta
|
Ecosystem Type |
Unclassified
|
Ecosystem Subtype |
Unclassified
|
Specific Ecosystem |
Unclassified
|
ORGANISM EXTERNAL REFERENCES | |
Strain Info ID |
|
Genbank 16S ID |
|
GENERAL PROPERTIES | |
---|---|
Oxygen Requirement |
Aerobe
|
Cell Shape |
Rod-shaped
|
Motility |
Nonmotile
|
Sporulation |
Nonsporulating
|
Temperature Range |
Mesophile
|
Salinity |
|
pH |
|
Cell Diameter |
|
Cell Length |
|
Color |
|
Gram Staining |
Gram-
|
Biotic Relationships | Symbiotic |
Symbiotic Physical Interaction |
Endosymbiotic intracellular
|
Symbiotic Relationship |
|
Symbiont Name |
Periplaneta americana
|
Symbiont Taxon ID |
6973
|
Cell Arrangements |
Singles |
Diseases |
None |
Known Habitats |
Host Insect endosymbiont |
Metabolisms |
|
Phenotypes |
|
Energy Sources |
|
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