PROJECT NAME
GOLD Project ID
Gp0004858  
Project Name
Deinococcus pimensis KR-235, DSM 21231  
Other Names
  
Legacy ER Project ID
14695  
Legacy GOLD ID
Gi04184  
NCBI BioProject Name Deinococcus pimensis DSM 21231
NCBI BioProject ID 66373
NCBI BioProject Accession
PRJNA66373  
NCBI Locus Tag
Deipi  
NCBI BioSample Accession
SAMN02584908  
PI Jonathan Eisen
Added By Nikos Kyrpides on 2009-03-15
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance GEBA
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency Leibniz Institute (Germany)
U.S. Department of Energy (DOE) (USA)
Project Description
Deinococcus pimensis DSM 21231 genome sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information GEBA
Isolation
Taxonomy
Database DOE Joint Genome Institute
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Studies Continuation of the Genomic Encyclopedia of Bacteria and Archaea pilot project (GEBA)
Analysis Projects Deinococcus pimensis KR-235, DSM 21231
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 3: Improved-High-Quality Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX-Titanium
Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
70  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0004858
Organism Name
Deinococcus pimensis KR-235, DSM 21231  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
DEINOCOCCUS-THERMUS  
Genus
Deinococcus  
Genus Synonyms
  
Species
Deinococcus pimensis  
Subspecies
  
Species Synonyms
  
Strain
KR-235, DSM 21231  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 21231  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.9680  
Exemplar Name
Deinococcus pimensis  
Taxon DOI
10.1601/tx.9680  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 926554
NCBI Kingdom
  
NCBI Phylum
Deinococcus-Thermus  
NCBI Class
Deinococci  
NCBI Order
Deinococcales  
NCBI Family
Deinococcaceae  
NCBI Genus
Deinococcus  
NCBI Species
Deinococcus pimensis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Desert  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AY743277
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Soil
Metabolisms
  
Phenotypes Radiation resistant
Energy Sources
  

 

 

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