PROJECT NAME
GOLD Project ID
Gp0004857  
Project Name
Deinococcus hopiensis KR-140, DSM 18049  
Other Names
  
Legacy ER Project ID
14691  
Legacy GOLD ID
Gi04180  
NCBI BioProject Name Deinococcus hopiensis KR-140
NCBI BioProject ID 42099
NCBI BioProject Accession
PRJNA42099  
NCBI Locus Tag
deiho  
NCBI BioSample Accession
SAMN00790413  
PI Jonathan Eisen
Added By Nikos Kyrpides on 2009-03-15
Last Modified By Nikos Kyrpides on 2011-11-13
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance GEBA
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency Leibniz Institute (Germany)
U.S. Department of Energy (DOE) (USA)
Project Description
Deinococcus hopiensis KR-140 genome sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information GEBA
Isolation
DOE Joint Genome Institute
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Studies A Genomic Encyclopedia of Bacteria and Archaea (GEBA)
Analysis Projects Deinococcus hopiensis KR-140, DSM 18049
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX-Titanium
Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
65  
Chromosome Count
1  
Plasmid Count
10  
ORGANISM NAME
GOLD Organism ID Go0004857
Organism Name
Deinococcus hopiensis KR-140, DSM 18049  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
DEINOCOCCUS-THERMUS  
Genus
Deinococcus  
Genus Synonyms
  
Species
Deinococcus hopiensis  
Subspecies
  
Species Synonyms
  
Strain
KR-140, DSM 18049  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 18049  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.9676  
Exemplar Name
Deinococcus hopiensis  
Taxon DOI
10.1601/tx.9676  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 695939
NCBI Kingdom
  
NCBI Phylum
Deinococcus-Thermus  
NCBI Class
Deinococci  
NCBI Order
Deinococcales  
NCBI Family
Deinococcaceae  
NCBI Genus
Deinococcus  
NCBI Species
Deinococcus hopiensis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Desert  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AY743262
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Soil
Metabolisms
  
Phenotypes Radiation resistant
Energy Sources
  

 

 

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