PROJECT INFORMATION
GOLD Project ID
Gp0004779  
Project Name
Echinicola vietnamensis KMM 6221, DSM 17526  
Other Names
  
Legacy ER Project ID
14517  
Legacy GOLD ID
Gi04016, Gc02463  
NCBI BioProject Name Echinicola vietnamensis DSM 17526
NCBI BioProject ID 65035
NCBI BioProject Accession PRJNA65035
NCBI Locus Tag
Echvi  
NCBI BioSample Accession SAMN02232018
PI Jonathan Eisen
Added By Nikos Kyrpides on 2009-01-25
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance Tree of Life
GEBA
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency U.S. Department of Energy (DOE) (USA)
Leibniz Institute (Germany)
Project Description
Echinicola vietnamensis DSM 17526 genome sequencing  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Isolation
GEBA
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Continuation of the Genomic Encyclopedia of Bacteria and Archaea pilot project (GEBA)
Analysis Projects Echinicola vietnamensis KMM 6221, DSM 17526
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454 GS FLX Titanium
Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
45  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0004779
Organism Name
Echinicola vietnamensis KMM 6221, DSM 17526  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Echinicola  
Genus Synonyms
  
Species
Echinicola vietnamensis  
Subspecies
  
Species Synonyms
  
Strain
KMM 6221, DSM 17526  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 17526  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.10707  
Exemplar Name
Echinicola vietnamensis  
Taxon DOI
10.1601/tx.10707  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 926556
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Cytophagia  
NCBI Order
Cytophagales  
NCBI Family
Cyclobacteriaceae  
NCBI Genus
Echinicola  
NCBI Species
Echinicola vietnamensis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Aquaculture  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AM406795
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
Halotolerant  
pH
  
Cell Diameter
  
Cell Length
  
Color
Pink  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Marine
Aquatic
Sea water
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph

 

 

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