PROJECT NAME
GOLD Project ID
Gp0004685  
Project Name
Solitalea canadensis USAM 9D, DSM 3403  
Other Names
  
Legacy ER Project ID
14519  
Legacy GOLD ID
Gi04018, Gc02159  
NCBI BioProject Name Solitalea canadensis DSM 3403
NCBI BioProject ID 60421
NCBI BioProject Accession
PRJNA60421  
NCBI Locus Tag
Solca  
NCBI BioSample Accession
SAMN02232052  
PI Jonathan Eisen
Added By Nikos Kyrpides on 2009-01-25
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance GEBA
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency Leibniz Institute (Germany)
U.S. Department of Energy (DOE) (USA)
Project Description
Solitalea canadensis DSM 3403 Genome sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information GEBA
Isolation
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies A Genomic Encyclopedia of Bacteria and Archaea (GEBA)
Analysis Projects Solitalea canadensis USAM 9D, DSM 3403
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX-Titanium
Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
37  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0004685
Organism Name
Solitalea canadensis USAM 9D, DSM 3403  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Solitalea  
Genus Synonyms
  
Species
Solitalea canadensis  
Subspecies
  
Species Synonyms
  
Strain
USAM 9D, DSM 3403  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 3403  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.8252  
Exemplar Name
Solitalea canadensis  
Taxon DOI
10.1601/tx.14581  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 929556
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Sphingobacteriia  
NCBI Order
Sphingobacteriales  
NCBI Family
Sphingobacteriaceae  
NCBI Genus
Solitalea  
NCBI Species
Solitalea canadensis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AB078046
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Filament-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
26c  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
White  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Soil
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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