PROJECT NAME
GOLD Project ID
Gp0004631  
Project Name
Leptospira interrogans sv. LAI IPAV  
Other Names
  
Legacy ER Project ID
14142  
Legacy GOLD ID
Gi03614, Gc02004  
NCBI BioProject Name Leptospira interrogans serovar Lai str. IPAV
NCBI BioProject ID 32553
NCBI BioProject Accession
PRJNA32553  
NCBI Locus Tag
LIF  
NCBI BioSample Accession
  
PI
Added By Nikos Kyrpides on 2008-11-22
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Animal Pathogen
Medical
Sequencing Center
  
Collaborating Institute Shanghai Jiao Tong University (China)
Funding Agency
  
Project Description
Avirulent strain  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Leptospirosis
Database
  
Genome Publications Cell research 21(8):1210-29 Comparative proteogenomic analysis of the Leptospira interrogans virulence-attenuated strain IPAV against the pathogenic strain 56601.
Other Publications
  
PROJECT COMPOSITION
Studies Leptospira interrogans sv LAI, IPAV
Analysis Projects Leptospira interrogans sv. LAI IPAV
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
35  
Chromosome Count
2  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0004631
Organism Name
Leptospira interrogans sv. LAI IPAV  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
SPIROCHAETES  
Genus
Leptospira  
Genus Synonyms
  
Species
Leptospira interrogans  
Subspecies
pomona  
Species Synonyms
  
Strain
IPAV  
Strain Synonyms
  
Serovar-Biovar
LAI  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 573825
NCBI Kingdom
  
NCBI Phylum
Spirochaetes  
NCBI Class
Spirochaetia  
NCBI Order
  
NCBI Family
Leptospiraceae  
NCBI Genus
Leptospira  
NCBI Species
Leptospira interrogans  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Spiral-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases Leptospirosis
Known Habitats Fresh water
Host
Soil
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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