PROJECT NAME
GOLD Project ID
Gp0004605  
Project Name
Lactobacillus rhamnosus Lc 705  
Other Names
  
Legacy ER Project ID
14289  
Legacy GOLD ID
Gi03771, Gc01105  
NCBI BioProject Name Lactobacillus rhamnosus Lc 705
NCBI BioProject ID 32197
NCBI BioProject Accession
PRJEA32197  
NCBI Locus Tag
LC705  
NCBI BioSample Accession
SAMEA2272728  
PI Matti Kankainen
Added By Nikos Kyrpides on 2009-01-03
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Food industry
Sequencing Center
  
Collaborating Institute University of Helsinki (Finland)
Funding Agency
  
Project Description
This organism has demonstrated probiotic effects, with immuno-modulatory properties and anti-pathogen effects.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Taxonomy
Wikipedia
Database
  
Genome Publications Proceedings of the National Academy of Sciences of the United States of America 106(40):17193-8 Comparative genomic analysis of Lactobacillus rhamnosus GG reveals pili containing a human- mucus binding protein.
Other Publications
  
PROJECT COMPOSITION
Studies Lactobacillus rhamnosus Lc 705
Analysis Projects Lactobacillus rhamnosus Lc 705
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS20
Library Method (MIGS-28)
40-45 kb  
Number Of Reads
35471  
Read Size
  
Vector
pCC1FOS  
GC Percent
47  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0004605
Organism Name
Lactobacillus rhamnosus Lc 705  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Lactobacillus  
Genus Synonyms
  
Species
Lactobacillus rhamnosus  
Subspecies
  
Species Synonyms
  
Strain
Lc 705  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 568704
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Lactobacillaceae  
NCBI Genus
Lactobacillus  
NCBI Species
Lactobacillus rhamnosus  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Microaerophilic  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Birds intestinal microflora
Host
Human intestinal microflora
Mammalian gastrointestinal tract
Metabolisms
  
Phenotypes Non-Pathogen
Probiotic
Energy Sources
  

 

 

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