PROJECT INFORMATION
GOLD Project ID
Gp0004409  
Project Name
Caulobacter vibrioides NA1000  
Other Names
  
Legacy ER Project ID
14475  
Legacy GOLD ID
Gc00939  
NCBI BioProject Name Caulobacter vibrioides NA1000
NCBI BioProject ID 32027
NCBI BioProject Accession PRJNA32027
NCBI Locus Tag
CCNA  
NCBI BioSample Accession SAMN02604151
PI Sean Crosson
Added By Nikos Kyrpides on 2009-01-23
Last Modified By Supratim Mukherjee on 2018-02-15
Project Comments
  
Project Status
Complete and Published  
Project Relevance Biogeochemical
Wastewater treatment
Environmental
Biotechnological
Bioremediation
Sequencing Center University of Chicago (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Laboratory strain  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Entrez
Wikipedia
Taxonomy
Database
  
Genome Publications Journal of bacteriology 192(14):3678-88 The genetic basis of laboratory adaptation in Caulobacter crescentus.
Other Publications
  
PROJECT COMPOSITION
Study Caulobacter crescentus NA1000
Analysis Projects Caulobacter vibrioides NA1000
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454 GS FLX
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
67  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0004409
Organism Name
Caulobacter vibrioides NA1000  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Caulobacter  
Genus Synonyms
  
Species
Caulobacter vibrioides  
Subspecies
  
Species Synonyms
  
Strain
NA1000  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 565050
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Caulobacterales  
NCBI Family
Caulobacteraceae  
NCBI Genus
Caulobacter  
NCBI Species
Caulobacter vibrioides  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Lab synthesis  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 123019
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Obligate aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
35  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases None
Known Habitats Marine
Soil
Fresh water
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?