PROJECT NAME
GOLD Project ID
Gp0004375  
Project Name
Desulfotomaculum carboxydivorans CO-1-SRB, DSM 14880  
Other Names
  
Legacy ER Project ID
14436  
Legacy GOLD ID
Gi03930, Gc01783  
NCBI BioProject Name Desulfotomaculum carboxydivorans CO-1-SRB
NCBI BioProject ID 50757
NCBI BioProject Accession
PRJNA50757  
NCBI Locus Tag
DESCA  
NCBI BioSample Accession
SAMN00713626  
PI Alfons Stams
Added By Nikos Kyrpides on 2009-01-17 00:00:00.0
Last Modified By Jon Bertsch on 2014-04-08 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Desulfotomaculum carboxydivorans CO-1-SRB genome sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Isolation
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies CSP_300132_795700
Analysis Projects Desulfotomaculum carboxydivorans CO-1-SRB, DSM 14880
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
47  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0004375
Organism Name
Desulfotomaculum carboxydivorans CO-1-SRB, DSM 14880  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Desulfotomaculum  
Genus Synonyms
  
Species
Desulfotomaculum carboxydivorans  
Subspecies
  
Species Synonyms
  
Strain
CO-1-SRB, DSM 14880  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 14880  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.9604  
Exemplar Name
Desulfotomaculum carboxydivorans  
Taxon DOI
10.1601/tx.9604  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 868595
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Clostridiales  
NCBI Family
Peptococcaceae  
NCBI Genus
Desulfotomaculum  
NCBI Species
Desulfotomaculum nigrificans  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Industrial production  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Obligate anaerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Sporulating  
Temperature Range
Mesophile  
Temperature Optimum
37  
Salinity
  
pH
6?0?8?0  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Animal gastrointestinal tract
Fresh water
Mud
Sea water
Sludge
Soil
Wastewater
Metabolisms Hydrogen sulfide gas release
Sulfate reducer
Phenotypes
  
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?