PROJECT NAME
GOLD Project ID
Gp0004365  
Project Name
Thermaerobacter marianensis 7p75a, DSM 12885  
Other Names
  
Legacy ER Project ID
14460  
Legacy GOLD ID
Gi03961, Gc01573  
NCBI BioProject Name Thermaerobacter marianensis DSM 12885
NCBI BioProject ID 38025
NCBI BioProject Accession
PRJNA38025  
NCBI Locus Tag
Tmar  
NCBI BioSample Accession
SAMN00713570  
PI Jonathan Eisen
Added By Nikos Kyrpides on 2009-01-18 00:00:00.0
Last Modified By Jon Bertsch on 2014-04-08 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance GEBA
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency Leibniz Institute (Germany)
U.S. Department of Energy (DOE) (USA)
Project Description
Thermaerobacter marianensis DSM 12885 genome sequencing project  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications Standards in genomic sciences 3(3):337-45 Complete genome sequence of Thermaerobacter marianensis type strain (7p75a).
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies A Genomic Encyclopedia of Bacteria and Archaea (GEBA)
Analysis Projects Thermaerobacter marianensis 7p75a, DSM 12885
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
72  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0004365
Organism Name
Thermaerobacter marianensis 7p75a, DSM 12885  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Thermaerobacter  
Genus Synonyms
  
Species
Thermaerobacter marianensis  
Subspecies
  
Species Synonyms
  
Strain
7p75a, DSM 12885  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 12885  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.4499  
Exemplar Name
Thermaerobacter marianensis  
Taxon DOI
10.1601/tx.4499  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 644966
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Clostridiales  
NCBI Family
Clostridiales Family XVII. Incertae Sedis  
NCBI Genus
Thermaerobacter  
NCBI Species
Thermaerobacter marianensis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Oceanic  
Specific Ecosystem
Sediment  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AB011495
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Obligate aerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Hyperthermophile  
Temperature Optimum
75  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Pairs
Singles
Diseases
  
Known Habitats Deep sea
Marine
Mud
Metabolisms
  
Phenotypes
  
Energy Sources Chemoheterotroph
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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