PROJECT NAME
GOLD Project ID
Gp0004361  
Project Name
Rubrobacter radiotolerans DSM 5868  
Other Names
  
Legacy ER Project ID
14456  
Legacy GOLD ID
Gi03954  
NCBI BioProject Name Rubrobacter radiotolerans DSM 5868
NCBI BioProject ID 37865
NCBI BioProject Accession
PRJNA37865  
NCBI Locus Tag
Rrad  
NCBI BioSample Accession
SAMN00767673  
PI Jonathan Eisen
Added By Nikos Kyrpides on 2009-01-18
Last Modified By Nikos Kyrpides on 2011-09-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance GEBA
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency Leibniz Institute (Germany)
U.S. Department of Energy (DOE) (USA)
Project Description
High radiation-resistant, pink-pigmented, thermophilic bacteria  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Taxonomy
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Studies A Genomic Encyclopedia of Bacteria and Archaea (GEBA)
Analysis Projects Rubrobacter radiotolerans DSM 5868
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
67  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0004361
Organism Name
Rubrobacter radiotolerans DSM 5868  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Rubrobacter  
Genus Synonyms
  
Species
Rubrobacter radiotolerans  
Subspecies
  
Species Synonyms
  
Strain
DSM 5868  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 5868  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.5869  
Exemplar Name
Rubrobacter radiotolerans  
Taxon DOI
10.1601/tx.5724  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 643560
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Rubrobacteria  
NCBI Order
Rubrobacterales  
NCBI Family
Rubrobacteraceae  
NCBI Genus
Rubrobacter  
NCBI Species
Rubrobacter radiotolerans  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Thermal springs  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID U65647
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Thermophile  
Temperature Optimum
60  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Aquatic
Hot spring
Metabolisms
  
Phenotypes Radiation resistant
Energy Sources Heterotroph

 

 

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