PROJECT NAME
GOLD Project ID
Gp0004249  
Project Name
Tolumonas auensis TA 4, DSM 9187  
Other Names
  
Legacy ER Project ID
14555  
Legacy GOLD ID
Gi04053, Gc01004  
NCBI BioProject Name Tolumonas auensis DSM 9187
NCBI BioProject ID 33873
NCBI BioProject Accession
PRJNA33873  
NCBI Locus Tag
Tola  
NCBI BioSample Accession
SAMN02598508  
PI Harry Beller
Added By Nikos Kyrpides on 2009-02-12
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Tolulene-producing bacterium  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Taxonomy
Entrez
Database
  
Genome Publications 22180815
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Biofuel Production
Analysis Projects Tolumonas auensis TA 4, DSM 9187
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX
Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
49  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0004249
Organism Name
Tolumonas auensis TA 4, DSM 9187  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Tolumonas  
Genus Synonyms
  
Species
Tolumonas auensis  
Subspecies
  
Species Synonyms
  
Strain
TA 4, DSM 9187  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 9187  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.3079  
Exemplar Name
Tolumonas auensis  
Taxon DOI
10.1601/tx.3079  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 595494
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Aeromonadales  
NCBI Family
Aeromonadaceae  
NCBI Genus
Tolumonas  
NCBI Species
Tolumonas auensis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Lentic  
Specific Ecosystem
Sediment  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 161342
Genbank 16S ID X92889
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
22  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Pairs
Singles
Diseases None
Known Habitats Aquatic
Fresh water
Sediment
Metabolisms
  
Phenotypes
  
Energy Sources Chemoorganotroph
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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