PROJECT INFORMATION
GOLD Project ID
Gp0004235  
Project Name
Candidatus Liberibacter asiaticus psy62  
Other Names
  
Legacy ER Project ID
14067  
Legacy GOLD ID
Gi03541, Gc01081  
NCBI BioProject Name Candidatus Liberibacter asiaticus str. psy62
NCBI BioProject ID 29835
NCBI BioProject Accession PRJNA29835
NCBI Locus Tag
CLIBASIA  
NCBI BioSample Accession SAMN02603311
PI Yongping Duan
Added By Nikos Kyrpides on 2008-10-25
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance Plant Pathogen
Agricultural
Sequencing Center Baylor College of Medicine
Collaborating Institute University of Florida (USA)
Funding Agency U.S. Department of Agriculture (France)
Project Description
Causative agent of huanglongbing (citrus greening disease)  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Taxonomy
Entrez
Database
  
Genome Publications Molecular plant-microbe interactions : MPMI 22(8):1011-20 Complete genome sequence of citrus huanglongbing bacterium, 'Candidatus Liberibacter asiaticus' obtained through metagenomics.
Other Publications
  
PROJECT COMPOSITION
Study Candidatus Liberibacter asiaticus psy62
Analysis Projects Candidatus Liberibacter asiaticus psy62
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454 GS FLX
Library Method (MIGS-28)
  
Number Of Reads
91,875  
Read Size
  
Vector
  
GC Percent
36  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0004235
Organism Name
Candidatus Liberibacter asiaticus psy62  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
  
Genus Synonyms
  
Species
Candidatus Liberibacter asiaticus psy62  
Subspecies
  
Species Synonyms
  
Strain
psy62  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 537021
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhizobiales  
NCBI Family
Rhizobiaceae  
NCBI Genus
Liberibacter  
NCBI Species
Candidatus Liberibacter asiaticus  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Insecta  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Huanglongbing
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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