PROJECT INFORMATION
GOLD Project ID
Gp0004107  
Project Name
Buchnera aphidicola Tuc7  
Other Names
  
Legacy ER Project ID
13999  
Legacy GOLD ID
Gi03471, Gc00920  
NCBI BioProject Name Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)
NCBI BioProject ID 31223
NCBI BioProject Accession PRJNA31223
NCBI Locus Tag
BUAPTUC7  
NCBI BioSample Accession SAMN02604133
PI Moran NA
Added By Nikos Kyrpides on 2008-10-05
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
Project Status
Complete and Published  
Project Relevance Evolution
Biotechnological
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute University of Arizona (USA)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Pea aphid symbiont  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Wikipedia
Database
  
Genome Publications "Science (New York, N.Y.)" 323(5912):379-82 The dynamics and time scale of ongoing genomic erosion in symbiotic bacteria.
Other Publications
  
PROJECT COMPOSITION
Study The dynamics and time scale of ongoing genomic erosion in symbiotic bacteria
Analysis Projects Buchnera aphidicola Tuc7
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
26  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0004107
Organism Name
Buchnera aphidicola Tuc7  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Buchnera  
Genus Synonyms
  
Species
Buchnera aphidicola  
Subspecies
  
Species Synonyms
  
Strain
Tuc7  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
No  
Culture Type
  
Organism Type
Natural  
Uncultured Type
Eukaryotic symbiont  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 561501
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacterales  
NCBI Family
Erwiniaceae  
NCBI Genus
Buchnera  
NCBI Species
Buchnera aphidicola  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Insecta  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
3 um  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Symbiotic
Symbiotic Physical Interaction
Endosymbiotic intracellular  
Symbiotic Relationship
Mutualistic  
Symbiont Name
Acyrthosiphon pisum  
Symbiont Taxon ID
7029  
Cell Arrangements Singles
Diseases None
Known Habitats Host
Insect endosymbiont
Endosymbiont
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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