PROJECT INFORMATION | |
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GOLD Project ID
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Gp0004031
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Project Name
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Chlamydia trachomatis sv. J 6276
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Other Names
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Legacy ER Project ID
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14044
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Legacy GOLD ID
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Gi03518
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NCBI BioProject Name | Chlamydia trachomatis 6276 |
NCBI BioProject ID
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32183 |
NCBI BioProject Accession
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PRJNA32183 |
NCBI Locus Tag
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C13
|
NCBI BioSample Accession
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SAMN02470780 |
PI | |
Added By |
Nikos Kyrpides
on 2008-10-17 |
Last Modified By |
Jon Bertsch
on 2014-06-14 |
Project Comments |
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Project Status
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Permanent Draft
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Project Relevance
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Animal Pathogen Human Pathogen Medical |
Sequencing Center
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Oregon State University
(USA)
|
Collaborating Institute
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Funding Agency
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Project Description
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Clinical isolate
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Project Information Visibility
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Public |
PROJECT TYPE | |
Specimen
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Organism |
Nucleic Acid
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DNA |
Sequencing Strategy
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Whole Genome Sequencing
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EXTERNAL PROJECT LINKS | |
Project Information
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Database
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Genome Publications
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Other Publications
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PROJECT COMPOSITION | |
Study |
Chlamydia trachomatis sv J, 6276 |
Organism |
Chlamydia trachomatis sv. J 6276 |
Analysis Projects |
Chlamydia trachomatis sv. J 6276 |
Number of Analysis Projects |
1 |
Number of DAPs |
0
|
SEQUENCING INFORMATION | |
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Sequencing Status
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Complete |
Sequencing Quality (MIGS-31) |
Level 6: Finished |
Finishing Goal
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Sequencing Comments
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Sequencing Technology
(MIGS-29)
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Solexa Illumina |
Library Method
(MIGS-28)
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Number Of Reads
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Read Size
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Vector
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GC Percent |
41
|
Chromosome Count |
1
|
Plasmid Count |
|
ORGANISM NAME | |
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GOLD Organism ID |
Go0004031 |
Organism Name |
Chlamydia trachomatis sv. J 6276
|
Other names (alias, synonyms, short names, common names) |
|
Organism Domain |
BACTERIAL
|
Phylogeny |
CHLAMYDIAE
|
Genus |
Chlamydia
|
Genus Synonyms |
|
Species |
Chlamydia trachomatis
|
Subspecies |
|
Species Synonyms |
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Strain |
6276
|
Strain Synonyms |
|
Serovar-Biovar |
J
|
Culture Collection ID |
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Type Strain |
Unknown
|
Exemplar DOI |
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Exemplar Name |
|
Taxon DOI |
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Biosafety Level |
|
Organism Comments |
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Cultured |
Yes
|
Culture Type |
Isolate
|
Organism Type |
Natural
|
Uncultured Type |
|
Commercial Strain |
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Commercial Strain Comments |
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ORGANISM TAXONOMY
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NCBI Taxonomy ID |
564416 |
NCBI Superkingdom |
Bacteria
|
NCBI Kingdom |
|
NCBI Phylum |
Chlamydiae
|
NCBI Class |
Chlamydiia
|
NCBI Order |
Chlamydiales
|
NCBI Family |
Chlamydiaceae
|
NCBI Genus |
Chlamydia
|
NCBI Species |
Chlamydia trachomatis
|
ISOLATION CLASSIFICATION | |
Ecosystem |
Host-associated
|
Ecosystem Category |
Unclassified
|
Ecosystem Type |
Unclassified
|
Ecosystem Subtype |
Unclassified
|
Specific Ecosystem |
Unclassified
|
ORGANISM EXTERNAL REFERENCES | |
Strain Info ID |
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Genbank 16S ID |
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GENERAL PROPERTIES | |
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Oxygen Requirement |
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Cell Shape |
Rod-shaped
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Motility |
Nonmotile
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Sporulation |
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Temperature Range |
Mesophile
|
Temperature Optimum |
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Salinity |
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pH |
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Cell Diameter |
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Cell Length |
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Color |
|
Gram Staining |
Gram-
|
Biotic Relationships | Symbiotic |
Symbiotic Physical Interaction |
Endosymbiotic intracellular
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Symbiotic Relationship |
Parasitic
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Symbiont Name |
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Symbiont Taxon ID |
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Cell Arrangements |
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Diseases |
Urogenital infection |
Known Habitats |
Host |
Metabolisms |
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Phenotypes |
Pathogen |
Energy Sources |
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