PROJECT INFORMATION
GOLD Project ID
Gp0003986  
Project Name
Rhodobacter sphaeroides KD131  
Other Names
  
Legacy ER Project ID
173  
Legacy GOLD ID
Gi03345, Gc00889  
NCBI BioProject Name Rhodobacter sphaeroides KD131
NCBI BioProject ID 31111
NCBI BioProject Accession PRJNA31111
NCBI Locus Tag
RSKD131  
NCBI BioSample Accession SAMN02603252
PI Lim S-K
Added By Nikos Kyrpides on 2008-09-06
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance Biohydrogen
Bioenergy
Comparative analysis
Biotechnological
Energy production
Sequencing Center Geno Technology Inc. (South Korea)
Collaborating Institute
  
Funding Agency
  
Project Description
This strain is being sequenced for comparative genome analysis  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Database
  
Genome Publications Journal of bacteriology 191(3):1118-9 Complete genome sequence of Rhodobacter sphaeroides KD131.
Other Publications
  
PROJECT COMPOSITION
Study Rhodobacter sphaeroides KD131
Analysis Projects Rhodobacter sphaeroides KD131
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
2Kb, 35Kb  
Number Of Reads
38063  
Read Size
  
Vector
  
GC Percent
69  
Chromosome Count
2  
Plasmid Count
2  
ORGANISM NAME
GOLD Organism ID Go0003986
Organism Name
Rhodobacter sphaeroides KD131  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Rhodobacter  
Genus Synonyms
  
Species
Rhodobacter sphaeroides  
Subspecies
  
Species Synonyms
  
Strain
KD131  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
KCTC 12085  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 557760
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodobacterales  
NCBI Family
Rhodobacteraceae  
NCBI Genus
Rhodobacter  
NCBI Species
Rhodobacter sphaeroides  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Oceanic  
Specific Ecosystem
Sediment  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
25 - 35  
Salinity
Halophile  
pH
  
Cell Diameter
  
Cell Length
  
Color
Purple  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Chains
Diseases
  
Known Habitats Marine
Mud
Aquatic
Metabolisms Hydrogen production
Phenotypes
  
Energy Sources Photosynthetic

 

 

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