PROJECT INFORMATION
GOLD Project ID
Gp0003979  
Project Name
Thermococcus sibiricus MM 739  
Other Names
  
Legacy ER Project ID
13797  
Legacy GOLD ID
Gi03273, Gc01009  
NCBI BioProject Name Thermococcus sibiricus MM 739
NCBI BioProject ID 34531
NCBI BioProject Accession PRJNA34531
NCBI Locus Tag
TSIB  
NCBI BioSample Accession SAMN02603090
PI Bonch-Osmolovskaya EA
Added By Nikos Kyrpides on 2008-07-10
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance Comparative analysis
Biotechnological
Sequencing Center Russian Academy of Science, Centre Bioengineering (Russia)
Collaborating Institute
  
Funding Agency
  
Project Description
A hyperthermophilic anaerobic archaeon isolated from an oil reservoir in Western Siberia  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Taxonomy
Isolation
Entrez
Database
  
Genome Publications Applied and environmental microbiology 75(13):4580-8 Metabolic versatility and indigenous origin of the archaeon Thermococcus sibiricus, isolated from a siberian oil reservoir, as revealed by genome analysis.
Other Publications
  
PROJECT COMPOSITION
Study Thermococcus sibiricus MM 739
Analysis Projects Thermococcus sibiricus MM 739
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454 GS FLX
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
40  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0003979
Organism Name
Thermococcus sibiricus MM 739  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-THERMOCOCCI  
Genus
Thermococcus  
Genus Synonyms
  
Species
Thermococcus sibiricus  
Subspecies
  
Species Synonyms
  
Strain
MM 739  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 12597  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.391  
Exemplar Name
Thermococcus sibiricus MM 739  
Taxon DOI
10.1601/tx.391  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 604354
NCBI Superkingdom
Archaea  
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Thermococci  
NCBI Order
Thermococcales  
NCBI Family
Thermococcaceae  
NCBI Genus
Thermococcus  
NCBI Species
Thermococcus sibiricus  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Wastewater  
Ecosystem Type
Industrial wastewater  
Ecosystem Subtype
Petrochemical  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 163280
Genbank 16S ID AJ238992
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Coccus-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Hyperthermophile  
Temperature Optimum
78  
Salinity
  
pH
5.8 - 9.0  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Hot spring
Metabolisms
  
Phenotypes
  
Energy Sources Organotroph

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?