PROJECT INFORMATION | |
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GOLD Project ID
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Gp0003977
|
Project Name
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Acidilobus saccharovorans 345-15
|
Other Names
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Legacy ER Project ID
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13795
|
Legacy GOLD ID
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Gi03271, Gc01364
|
NCBI BioProject Name | Acidilobus saccharovorans 345-15 |
NCBI BioProject ID
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39927 |
NCBI BioProject Accession
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PRJNA39927 |
NCBI Locus Tag
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ASAC
|
NCBI BioSample Accession
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SAMN02603091 |
PI | Bonch-Osmolovskaya EA |
Added By |
Nikos Kyrpides
on 2008-07-10 |
Last Modified By |
Alejandro Rodriguez Mojica
on 2018-07-27 |
Project Comments |
|
Project Status
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Complete and Published
|
Project Relevance
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Biotechnological |
Sequencing Center
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Russian Academy of Science, Centre Bioengineering
(Russia)
|
Collaborating Institute
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|
Funding Agency
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|
Project Description
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Acidilobus saccharovorans genome sequencing
|
Is JGI Project |
No
|
Project Information Visibility
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Public |
PROJECT TYPE | |
Specimen
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Organism |
Nucleic Acid
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DNA |
Sequencing Strategy
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Whole Genome Sequencing
|
EXTERNAL PROJECT LINKS | |
Project Information
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|
Database
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|
Genome Publications
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Applied and environmental microbiology
76(16):5652-7
The genome sequence of the crenarchaeon Acidilobus saccharovorans supports a new order, Acidilobales, and suggests an important ecological role in terrestrial acidic hot springs.
|
Other Publications
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SRA Experiment |
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PROJECT COMPOSITION | |
Study |
Acidilobus saccharovorans 345-15 |
Organism |
Acidilobus saccharovorans 345-15 |
Analysis Projects |
Acidilobus saccharovorans 345-15 |
Number of Analysis Projects (AP) |
1 |
Number of Derived Analyis Projects (DAP) |
0
|
SEQUENCING INFORMATION | |
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Sequencing Status
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Complete |
Sequencing Quality (MIGS-31) |
Level 6: Finished |
Finishing Goal
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Contamination Screening Input
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DNA Amplification Method
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Sequencing Comments
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DNA Amplification Kit
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Sequencing Technology
(MIGS-29)
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Library Method
(MIGS-28)
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Library Layout
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Library Screening Method
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Number Of Reads
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Read Size
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Vector
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|
GC Percent |
57
|
Chromosome Count |
1
|
Plasmid Count |
0
|
ORGANISM NAME | |
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GOLD Organism ID |
Go0003977 |
Organism Name |
Acidilobus saccharovorans 345-15
|
Other names (alias, synonyms, short names, common names) |
|
Organism Domain |
ARCHAEAL
|
Phylogeny |
CRENARCHAEOTA-THERMOPROTEI
|
Genus |
Acidilobus
|
Genus Synonyms |
|
Species |
Acidilobus saccharovorans
|
Subspecies |
|
Species Synonyms |
|
Strain |
345-15
|
Strain Synonyms |
|
Serovar/Cultivar |
|
Culture Collection ID |
DSM 16705
|
Type Strain |
Yes
|
Exemplar DOI |
10.1601/ex.14881
|
Exemplar Name |
Acidilobus saccharovorans
|
Taxon DOI |
10.1601/tx.14881
|
Biosafety Level |
|
Organism Comments |
|
Cultured |
Yes
|
Culture Type |
Isolate
|
Organism Type |
Natural
|
Uncultured Type |
|
Commercial Strain |
|
Commercial Strain Comments |
|
ORGANISM TAXONOMY
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|
NCBI Taxonomy ID |
666510 |
NCBI Superkingdom |
Archaea
|
NCBI Kingdom |
|
NCBI Phylum |
Crenarchaeota
|
NCBI Class |
Thermoprotei
|
NCBI Order |
Acidilobales
|
NCBI Family |
Acidilobaceae
|
NCBI Genus |
Acidilobus
|
NCBI Species |
Acidilobus saccharovorans
|
ISOLATION CLASSIFICATION | |
Ecosystem |
Environmental
|
Ecosystem Category |
Aquatic
|
Ecosystem Type |
Thermal springs
|
Ecosystem Subtype |
Unclassified
|
Specific Ecosystem |
Unclassified
|
ORGANISM EXTERNAL REFERENCES | |
Strain Info ID |
|
Genbank 16S ID |
AY350586 |
GENERAL PROPERTIES | |
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Oxygen Requirement |
Anaerobe
|
Cell Shape |
Coccus-shaped
|
Motility |
Nonmotile
|
Sporulation |
|
Temperature Range |
Hyperthermophile
|
Salinity |
|
pH |
3.5
|
Cell Diameter |
|
Cell Length |
|
Color |
|
Gram Staining |
Gram-
|
Biotic Relationships | Free living |
Symbiotic Physical Interaction |
|
Symbiotic Relationship |
|
Symbiont Name |
|
Symbiont Taxon ID |
|
Cell Arrangements |
|
Diseases |
None |
Known Habitats |
Hot spring Fresh water |
Metabolisms |
|
Phenotypes |
Acidophile |
Energy Sources |
|
CYANOBACTERIA METADATA | |
Filaments |
|
Filament Type |
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Differentiated Cells |
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Position Of Heterocysts |
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Cysts |
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Mode Of Reproduction |
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Trichome |
|
Trichome Type |
|
Carotenoids |
|
Pigments |
|
Phage Infectivity |
|
Phage Type |
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Restriction Enzyme |
|
Toxin Production |
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Toxin Type |
|
Secondary Metabolites |
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Developmental Cycle |
|
Branching |
|
Gas Vesicles |
|
Gas Vesicle Type |
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Diagnostic Inclusion Body Information |
|
Extracellular Structures |
|
Bloom Forming |
|
Pigment Type |
|
Complementary chromatic adaptation (CCA) |
|
Medium Types |
|
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