PROJECT NAME
GOLD Project ID
Gp0003955  
Project Name
Mesorhizobium opportunistum WSM2075  
Other Names
  
Legacy ER Project ID
13803  
Legacy GOLD ID
Gi03279, Gc01853  
NCBI BioProject Name Mesorhizobium opportunistum WSM2075
NCBI BioProject ID 33861
NCBI BioProject Accession
PRJNA33861  
NCBI Locus Tag
Mesop  
NCBI BioSample Accession
SAMN02232036  
PI Nandasena, Kemanthi G
Added By Nikos Kyrpides on 2008-07-11
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Agricultural
Nitrogen fixation
Root Nodulating Bacteria (RNB)
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
This strain will be used for comparative genome analysis  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies CSP_300131_795687
Analysis Projects Mesorhizobium opportunistum WSM2075
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX-Titanium
Illumina GAii
Library Method (MIGS-28)
Titanium standard library and paired end 454 libraries  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
63  
Chromosome Count
1  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0003955
Organism Name
Mesorhizobium opportunistum WSM2075  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Mesorhizobium  
Genus Synonyms
  
Species
Mesorhizobium opportunistum  
Subspecies
  
Species Synonyms
  
Strain
WSM2075  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
LMG 24607  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.14621  
Exemplar Name
Mesorhizobium opportunistum  
Taxon DOI
10.1601/tx.14621  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 536019
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhizobiales  
NCBI Family
Phyllobacteriaceae  
NCBI Genus
Mesorhizobium  
NCBI Species
Mesorhizobium opportunistum  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Rhizoplane  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AY601515
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 1
Term Symbiotic
Symbiotic Physical Interaction
Endosymbiotic intracellular  
Symbiotic Relationship
Parasitic  
Symbiont Name
Biserrula pelecinus L  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Host
Rhizosphere
Root nodule
Metabolisms Nitrogen fixation
Phenotypes
  
Energy Sources Chemoorganotroph
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?