PROJECT NAME
GOLD Project ID
Gp0003943  
Project Name
Desulfovibrio fructosovorans JJ  
Other Names
  
Legacy ER Project ID
13813  
Legacy GOLD ID
Gi03289  
NCBI BioProject Name Desulfovibrio fructosovorans JJ
NCBI BioProject ID 43359
NCBI BioProject Accession
PRJNA43359  
NCBI Locus Tag
Desfr  
NCBI BioSample Accession
SAMN00103625  
PI Terry Hazen
Added By Nikos Kyrpides on 2008-07-12
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Bioremediation
Biotechnological
Comparative analysis
Environmental
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Desulfovibrio fructosovorans JJ whole genome sequencing project  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Desulfovibrio Sequencing
Analysis Projects Desulfovibrio fructosovorans JJ
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 3: Improved-High-Quality Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Illumina
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
64  
Chromosome Count
1  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0003943
Organism Name
Desulfovibrio fructosovorans JJ  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-DELTA  
Genus
Desulfovibrio  
Genus Synonyms
  
Species
Desulfovibrio fructosovorans  
Subspecies
  
Species Synonyms
  
Strain
JJ  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 3604  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.3482  
Exemplar Name
Desulfovibrio fructosivorans  
Taxon DOI
10.1601/tx.3482  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 596151
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Deltaproteobacteria  
NCBI Order
Desulfovibrionales  
NCBI Family
Desulfovibrionaceae  
NCBI Genus
Desulfovibrio  
NCBI Species
Desulfovibrio fructosivorans  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Oceanic  
Specific Ecosystem
Sediment  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AF050101
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
35  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases None
Known Habitats Aquatic
Mud
Sediment
Metabolisms Sulfate reducer
Phenotypes
  
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?