PROJECT NAME
GOLD Project ID
Gp0003722  
Project Name
Desulfurococcus kamchatkensis 1221n  
Other Names
  
Legacy ER Project ID
13638  
Legacy GOLD ID
Gi03124, Gc00873  
NCBI BioProject Name Desulfurococcus kamchatkensis 1221n
NCBI BioProject ID 28141
NCBI BioProject Accession
PRJNA28141  
NCBI Locus Tag
DKAM  
NCBI BioSample Accession
SAMN02603098  
PI Bonch-Osmolovskaya EA
Added By Nikos Kyrpides on 2008-05-17
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center Russian Academy of Science, Centre Bioengineering (Russia)
Collaborating Institute Winogradsky Institute of Microbiology
Funding Agency
  
Project Description
Hyperthermophilic archaeon  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Taxonomy
Entrez
Database
  
Genome Publications Journal of bacteriology 191(7):2371-9 Complete genome sequence of the anaerobic, protein-degrading hyperthermophilic crenarchaeon Desulfurococcus kamchatkensis.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Desulfurococcus kamchatkensis 1221n
Analysis Projects Desulfurococcus kamchatkensis 1221n
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX
Sanger
Library Method (MIGS-28)
1.2-3Kb  
Number Of Reads
  
Read Size
  
Vector
pUC19  
GC Percent
45  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0003722
Organism Name
Desulfurococcus kamchatkensis 1221n  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
CRENARCHAEOTA-THERMOPROTEI  
Genus
Desulfurococcus  
Genus Synonyms
  
Species
Desulfurococcus kamchatkensis  
Subspecies
  
Species Synonyms
  
Strain
1221n  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 18924  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.14460  
Exemplar Name
Desulfurococcus kamchatkensis  
Taxon DOI
10.1601/tx.14460  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 490899
NCBI Kingdom
  
NCBI Phylum
Crenarchaeota  
NCBI Class
Thermoprotei  
NCBI Order
Desulfurococcales  
NCBI Family
Desulfurococcaceae  
NCBI Genus
Desulfurococcus  
NCBI Species
Desulfurococcus kamchatkensis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Sediment  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 843237
Genbank 16S ID EU167539
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Obligate anaerobe  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Hyperthermophile  
Temperature Optimum
85  
Salinity
  
pH
5.5 - 7.5  
Cell Diameter
1um  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Fresh water
Hot spring
Sediment
Metabolisms
  
Phenotypes
  
Energy Sources Organotroph

 

 

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