PROJECT NAME
GOLD Project ID
Gp0003710  
Project Name
Palaeococcus ferrophilus DMJ, DSM 13482  
Other Names
  
Legacy ER Project ID
13514  
Legacy GOLD ID
Gi02933  
NCBI BioProject Name Palaeococcus ferrophilus DSM 13482
NCBI BioProject ID 33583
NCBI BioProject Accession
PRJNA33583  
NCBI Locus Tag
Pfer  
NCBI BioSample Accession
SAMN02744072  
PI Jonathan Eisen
Added By Nikos Kyrpides on 2008-01-19
Last Modified By JGI automated process on 2014-05-05
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Biotechnological
GEBA
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Barophilic hyperthermophilic archaeon  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information GEBA
Taxonomy
Isolation
Entrez
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies A Genomic Encyclopedia of Bacteria and Archaea (GEBA)
Analysis Projects Palaeococcus ferrophilus DMJ, DSM 13482
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
54  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0003710
Organism Name
Palaeococcus ferrophilus DMJ, DSM 13482  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-THERMOCOCCI  
Genus
Palaeococcus  
Genus Synonyms
  
Species
Palaeococcus ferrophilus  
Subspecies
  
Species Synonyms
  
Strain
DSM 13482  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 13482  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.397  
Exemplar Name
Palaeococcus ferrophilus  
Taxon DOI
10.1601/tx.397  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 588319
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Thermococci  
NCBI Order
Thermococcales  
NCBI Family
Thermococcaceae  
NCBI Genus
Palaeococcus  
NCBI Species
Palaeococcus ferrophilus  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Hydrothermal vents  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AB019239
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Coccus-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Hyperthermophile  
Temperature Optimum
83  
Salinity
  
pH
6.0  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Pairs
Singles
Diseases None
Known Habitats Aquatic
Deep sea
Marine
Metabolisms
  
Phenotypes Barophile
Energy Sources Chemoorganotroph

 

 

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