PROJECT NAME
GOLD Project ID
Gp0003688  
Project Name
Thermosphaera aggregans M11TL, DSM 11486  
Other Names
  
Legacy ER Project ID
13527  
Legacy GOLD ID
Gi02946, Gc01275  
NCBI BioProject Name Thermosphaera aggregans DSM 11486
NCBI BioProject ID 36571
NCBI BioProject Accession
PRJNA36571  
NCBI Locus Tag
Tagg  
NCBI BioSample Accession
SAMN02598509  
PI Jonathan Eisen
Added By Nikos Kyrpides on 2008-01-19
Last Modified By Jyothi Mallajosyula on 2014-08-04
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Comparative analysis
GEBA
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency Leibniz Institute (Germany)
U.S. Department of Energy (DOE) (USA)
Project Description
This strain will be used for comparative genome analysis  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information GEBA
Isolation
Wikipedia
Database
  
Genome Publications Standards in genomic sciences 2(3):245-59 Complete genome sequence of Thermosphaera aggregans type strain (M11TL).
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies A Genomic Encyclopedia of Bacteria and Archaea (GEBA)
Analysis Projects Thermosphaera aggregans M11TL, DSM 11486
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX-Titanium
Illumina
Library Method (MIGS-28)
454 standard, 454 pair end, Illumina  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
47  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0003688
Organism Name
Thermosphaera aggregans M11TL, DSM 11486  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
CRENARCHAEOTA-THERMOPROTEI  
Genus
Thermosphaera  
Genus Synonyms
  
Species
Thermosphaera aggregans  
Subspecies
  
Species Synonyms
  
Strain
M11TL, DSM 11486  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 11486  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.54  
Exemplar Name
Thermosphaera aggregans  
Taxon DOI
10.1601/tx.54  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 633148
NCBI Kingdom
  
NCBI Phylum
Crenarchaeota  
NCBI Class
Thermoprotei  
NCBI Order
Desulfurococcales  
NCBI Family
Desulfurococcaceae  
NCBI Genus
Thermosphaera  
NCBI Species
Thermosphaera aggregans  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Thermal springs  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 162690
Genbank 16S ID X99556
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Coccus-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Hyperthermophile  
Temperature Optimum
85  
Salinity
  
pH
6.5  
Cell Diameter
0.8 um  
Cell Length
0.8 um  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Chains
Pairs
Singles
Diseases None
Known Habitats Aquatic
Hot spring
Metabolisms
  
Phenotypes
  
Energy Sources Heterotroph
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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