PROJECT NAME
GOLD Project ID
Gp0003486  
Project Name
Caldisphaera lagunensis IC-154, DSM 15908  
Other Names
  
Legacy ER Project ID
13491  
Legacy GOLD ID
Gi02911, Gc02448  
NCBI BioProject Name Caldisphaera lagunensis DSM 15908
NCBI BioProject ID 70815
NCBI BioProject Accession
PRJNA70815  
NCBI Locus Tag
Calag  
NCBI BioSample Accession
SAMN02261426  
PI Jonathan Eisen
Added By Nikos Kyrpides on 2008-01-15
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance GEBA
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
GEBA  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Isolation
GEBA
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies A Genomic Encyclopedia of Bacteria and Archaea (GEBA)
Analysis Projects Caldisphaera lagunensis IC-154, DSM 15908
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX-Titanium
Illumina GAii
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
30  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0003486
Organism Name
Caldisphaera lagunensis IC-154, DSM 15908  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
CRENARCHAEOTA-THERMOPROTEI  
Genus
Caldisphaera  
Genus Synonyms
  
Species
Caldisphaera lagunensis  
Subspecies
  
Species Synonyms
  
Strain
IC-154, DSM 15908  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 15908  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.29  
Exemplar Name
Caldisphaera lagunensis  
Taxon DOI
10.1601/tx.29  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 200415
NCBI Kingdom
  
NCBI Phylum
Crenarchaeota  
NCBI Class
Thermoprotei  
NCBI Order
Acidilobales  
NCBI Family
Caldisphaeraceae  
NCBI Genus
Caldisphaera  
NCBI Species
Caldisphaera lagunensis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Thermal springs  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AB087499
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Coccus-shaped  
Motility
  
Sporulation
  
Temperature Range
Hyperthermophile  
Temperature Optimum
75  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Pairs
Singles
Diseases
  
Known Habitats Aquatic
Hot spring
Metabolisms
  
Phenotypes Acidophile
Energy Sources Heterotroph

 

 

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