PROJECT INFORMATION
GOLD Project ID
Gp0003406  
Project Name
Streptococcus mutans sv. C NN2025  
Other Names
  
Legacy ER Project ID
76  
Legacy GOLD ID
Gi03049, Gc01074  
NCBI BioProject Name Streptococcus mutans NN2025
NCBI BioProject ID 28997
NCBI BioProject Accession PRJDA28997
NCBI Locus Tag
SmuNN2025  
NCBI BioSample Accession
PI Nakagawa I
Added By Nikos Kyrpides on 2008-03-19
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance Human Pathogen
Medical
Sequencing Center University of Tokyo (Japan)
Collaborating Institute
  
Funding Agency
  
Project Description
Clinical isolate  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications BMC genomics 10(358):358 Comparative genomic analyses of Streptococcus mutans provide insights into chromosomal shuffling and species-specific content.
Other Publications
  
PROJECT COMPOSITION
Study Streptococcus mutans NN2025
Analysis Projects Streptococcus mutans sv. C NN2025
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
1-2Kb, 4-5Kb  
Number Of Reads
  
Read Size
  
Vector
pUC18  
GC Percent
37  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0003406
Organism Name
Streptococcus mutans sv. C NN2025  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Streptococcus  
Genus Synonyms
  
Species
Streptococcus mutans  
Subspecies
  
Species Synonyms
  
Strain
NN2025  
Strain Synonyms
  
Serovar-Biovar
C  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 511691
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Streptococcaceae  
NCBI Genus
Streptococcus  
NCBI Species
Streptococcus mutans  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Oral  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Pairs
Chains
Diseases Endocarditis
Dental caries
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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