PROJECT NAME
GOLD Project ID
Gp0003265  
Project Name
Chlorobaculum parvum DSM 263  
Other Names
  
Legacy ER Project ID
127  
Legacy GOLD ID
Gi03087, Gc00827  
NCBI BioProject Name Chlorobaculum parvum NCIB 8327
NCBI BioProject ID 29213
NCBI BioProject Accession
PRJNA29213  
NCBI Locus Tag
Cpar  
NCBI BioSample Accession
SAMN02598460  
PI Donald A. Bryant
Added By Nikos Kyrpides on 2008-04-19
Last Modified By Auto script update processes on 2014-05-20
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Comparative analysis
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Green sulfur bacterium  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Entrez
Taxonomy
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Chlorobia, 8 species
Analysis Projects Chlorobaculum parvum DSM 263
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
56  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0003265
Organism Name
Chlorobaculum parvum DSM 263  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
CHLOROBI  
Genus
Chlorobaculum  
Genus Synonyms
  
Species
Chlorobaculum parvum  
Subspecies
  
Species Synonyms
  
Strain
DSM 263  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 263  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.796  
Exemplar Name
Chlorobaculum parvum DSM 263  
Taxon DOI
10.1601/tx.796  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 517417
NCBI Kingdom
  
NCBI Phylum
Chlorobi  
NCBI Class
Chlorobia  
NCBI Order
Chlorobiales  
NCBI Family
Chlorobiaceae  
NCBI Genus
Chlorobaculum  
NCBI Species
Chlorobaculum parvum  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Wastewater  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 290922
Genbank 16S ID Y10647
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
28-32 C  
Salinity
  
pH
6.8-7.4  
Cell Diameter
1 um  
Cell Length
1.0-3.0 um  
Color
Green  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases None
Known Habitats Aquatic
Brackish water
Wastewater
Metabolisms
  
Phenotypes
  
Energy Sources Photolithotroph
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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