PROJECT NAME
GOLD Project ID
Gp0003235  
Project Name
Chlamydia trachomatis sv. L2 L2b/UCH-1/proctitis  
Other Names
  
Legacy ER Project ID
13545  
Legacy GOLD ID
Gc00713  
NCBI BioProject Name Chlamydia trachomatis L2b/UCH-1/proctitis
NCBI BioProject ID 28585
NCBI BioProject Accession
PRJNA28585  
NCBI Locus Tag
CTLon  
NCBI BioSample Accession
SAMEA1705954  
PI Parkhill
Added By Nikos Kyrpides on 2008-01-20
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Animal Pathogen
Human Pathogen
Medical
Sequencing Center Wellcome Trust Sanger Institute (United Kingdom)
Collaborating Institute
  
Funding Agency Wellcome Trust Sanger Institute (United Kingdom)
Project Description
Isolated from a case of proctitis  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Database
  
Genome Publications Genome research Chlamydia trachomatis: genome sequence analysis of lymphogranuloma venereum isolates.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Chlamydia trachomatis L2b/UCH-1/proctitis
Analysis Projects Chlamydia trachomatis sv. L2 L2b/UCH-1/proctitis
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS20
Sanger
Library Method (MIGS-28)
  
Number Of Reads
304953  
Read Size
  
Vector
  
GC Percent
41  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0003235
Organism Name
Chlamydia trachomatis sv. L2 L2b/UCH-1/proctitis  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
CHLAMYDIAE  
Genus
Chlamydia  
Genus Synonyms
  
Species
Chlamydia trachomatis  
Subspecies
  
Species Synonyms
  
Strain
L2b/UCH-1/proctitis  
Strain Synonyms
  
Serovar-Biovar
L2  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 471473
NCBI Kingdom
  
NCBI Phylum
Chlamydiae  
NCBI Class
Chlamydiia  
NCBI Order
Chlamydiales  
NCBI Family
Chlamydiaceae  
NCBI Genus
Chlamydia  
NCBI Species
Chlamydia trachomatis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 1
Term Symbiotic
Symbiotic Physical Interaction
Endosymbiotic intracellular  
Symbiotic Relationship
Parasitic  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Bronchitis
Lymphogranuloma vernerum
Pharyngitis
Pneumonia
Proctitis
Respiratory infection
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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