PROJECT NAME
GOLD Project ID
Gp0002309  
Project Name
Halorubrum lacusprofundi ATCC 49239  
Other Names
  
Legacy ER Project ID
12202  
Legacy GOLD ID
Gi01050, Gc00952  
NCBI BioProject Name Halorubrum lacusprofundi ATCC 49239
NCBI BioProject ID 18455
NCBI BioProject Accession
PRJNA18455  
NCBI Locus Tag
Hlac  
NCBI BioSample Accession
SAMN02598407  
PI Iain Anderson
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Extremely halophilic archaeon isolated from the Antarctic  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Taxonomy
Information
Entrez
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Diverse archaeal organisms
Analysis Projects Halorubrum lacusprofundi ATCC 49239
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
64  
Chromosome Count
2  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0002309
Organism Name
Halorubrum lacusprofundi ATCC 49239  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-HALOBACTERIA  
Genus
Halorubrum  
Genus Synonyms
  
Species
Halorubrum lacusprofundi  
Subspecies
  
Species Synonyms
  
Strain
ATCC 49239  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 49239  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.322  
Exemplar Name
Halorubrum lacusprofundi  
Taxon DOI
10.1601/tx.322  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 416348
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Halobacteria  
NCBI Order
Haloferacales  
NCBI Family
Haloferacaceae  
NCBI Genus
Halorubrum  
NCBI Species
Halorubrum lacusprofundi  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Lentic  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 113985
Genbank 16S ID X82170
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Psychrophile  
Temperature Optimum
31 - 37  
Salinity
Halophile  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Aquatic
Fresh water
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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