PROJECT NAME
GOLD Project ID
Gp0002308  
Project Name
Halothermothrix orenii H 168  
Other Names
  
Legacy ER Project ID
12201  
Legacy GOLD ID
Gi01049, Gc00927  
NCBI BioProject Name Halothermothrix orenii H 168
NCBI BioProject ID 16377
NCBI BioProject Accession
PRJNA16377  
NCBI Locus Tag
Hore  
NCBI BioSample Accession
SAMN00623047  
PI Phil Hugenholtz
Added By Kostas Mavrommatis on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Thermophillic halophile  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Taxonomy
Entrez
Isolation
Database
  
Genome Publications PloS one 4(1):e4192 Genome analysis of the anaerobic thermohalophilic bacterium Halothermothrix orenii.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Halothermothrix orenii DSM 9562
Analysis Projects Halothermothrix orenii H 168
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Sanger
Library Method (MIGS-28)
3-kb and fosmid (40-kb) libraries   
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
38  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0002308
Organism Name
Halothermothrix orenii H 168  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Halothermothrix  
Genus Synonyms
  
Species
Halothermothrix orenii  
Subspecies
  
Species Synonyms
  
Strain
H 168  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 9562  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.4586  
Exemplar Name
Halothermothrix orenii  
Taxon DOI
10.1601/tx.4586  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 373903
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Halanaerobiales  
NCBI Family
Halanaerobiaceae  
NCBI Genus
Halothermothrix  
NCBI Species
Halothermothrix orenii  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Non-marine Saline and Alkaline  
Ecosystem Subtype
Hypersaline  
Specific Ecosystem
Sediment  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 302651
Genbank 16S ID L22016
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
  
Temperature Range
Thermophile  
Temperature Optimum
60  
Salinity
Halophile  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases None
Known Habitats Aquatic
Fresh water
Sediment
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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