PROJECT NAME
GOLD Project ID
Gp0002277  
Project Name
Peptoniphilus asaccharolyticus UW 228, DSM 20463  
Other Names
  
Legacy ER Project ID
12176  
Legacy GOLD ID
Gi02546  
NCBI BioProject Name Peptoniphilus asaccharolyticus DSM 20463
NCBI BioProject ID 32601
NCBI BioProject Accession
PRJNA32601  
NCBI Locus Tag
Pepas  
NCBI BioSample Accession
SAMN00017477  
PI Jonathan Eisen
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Nikos Kyrpides on 2011-04-07
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
incomplete  
Project Relevance GEBA
Human Pathogen
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency Leibniz Institute (Germany)
U.S. Department of Energy (DOE) (USA)
Project Description
Associated with reproductive tract infections  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information GEBA
Database
  
Genome Publications
  
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies A Genomic Encyclopedia of Bacteria and Archaea (GEBA)
Analysis Projects Peptoniphilus asaccharolyticus UW 228, DSM 20463
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 3: Improved-High-Quality Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
32  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0002277
Organism Name
Peptoniphilus asaccharolyticus UW 228, DSM 20463  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Peptoniphilus  
Genus Synonyms
  
Species
Peptoniphilus asaccharolyticus  
Subspecies
  
Species Synonyms
  
Strain
UW 228, DSM 20463  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 20463  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.4306  
Exemplar Name
Peptoniphilus asaccharolyticus  
Taxon DOI
10.1601/tx.4213  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 573058
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Tissierellia  
NCBI Order
Tissierellales  
NCBI Family
Peptoniphilaceae  
NCBI Genus
Peptoniphilus  
NCBI Species
Peptoniphilus asaccharolyticus  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Oral  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID D14138
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
37  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Urogenital infection
Known Habitats Host
Human
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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