PROJECT INFORMATION | |
---|---|
GOLD Project ID
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Gp0002273
|
Project Name
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Mahella australiensis 50-1 BON, DSM 15567
|
Other Names
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|
Legacy ER Project ID
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12173
|
Legacy GOLD ID
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Gi02543, Gc01760
|
NCBI BioProject Name | Mahella australiensis 50-1 BON |
NCBI BioProject ID
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42243 |
NCBI BioProject Accession
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PRJNA42243 |
NCBI Locus Tag
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Mahau
|
NCBI BioSample Accession
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SAMN02232034 |
PI | Jonathan Eisen |
Added By |
Nikos Kyrpides
on 2007-11-27 |
Last Modified By |
Jon Bertsch
on 2014-04-08 |
Project Comments |
|
Project Status
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Complete and Published
|
Project Relevance
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Tree of Life GEBA |
Sequencing Center
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DOE Joint Genome Institute (JGI)
(USA)
|
Collaborating Institute
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Leibniz Institute
(Germany)
|
Funding Agency
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U.S. Department of Energy (DOE)
(USA)
|
Project Description
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Mahella australiensis 50-1 BON genome sequencing project
|
Project Information Visibility
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Public |
PROJECT TYPE | |
Specimen
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Organism |
Nucleic Acid
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DNA |
Sequencing Strategy
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Whole Genome Sequencing
|
EXTERNAL PROJECT LINKS | |
JGI Portal Download | Raw Sequence Data |
Project Information
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Isolation |
Database
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|
Genome Publications
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Standards in genomic sciences
4(3):331-41
Complete genome sequence of Mahella australiensis type strain (50-1 BON).
|
Other Publications
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|
PROJECT COMPOSITION | |
Study |
A Genomic Encyclopedia of Bacteria and Archaea (GEBA) |
Organism |
Mahella australiensis 50-1 BON, DSM 15567 |
Analysis Projects |
Mahella australiensis 50-1 BON, DSM 15567 |
Number of Analysis Projects |
1 |
Number of DAPs |
0
|
SEQUENCING INFORMATION | |
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Sequencing Status
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Complete |
Sequencing Quality (MIGS-31) |
Level 6: Finished |
Finishing Goal
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|
Sequencing Comments
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|
Sequencing Technology
(MIGS-29)
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Illumina GAIIx 454 GS FLX Titanium |
Library Method
(MIGS-28)
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|
Number Of Reads
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|
Read Size
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|
Vector
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|
GC Percent |
43
|
Chromosome Count |
1
|
Plasmid Count |
0
|
ORGANISM NAME | |
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GOLD Organism ID |
Go0002273 |
Organism Name |
Mahella australiensis 50-1 BON, DSM 15567
|
Other names (alias, synonyms, short names, common names) |
|
Organism Domain |
BACTERIAL
|
Phylogeny |
FIRMICUTES
|
Genus |
Mahella
|
Genus Synonyms |
|
Species |
Mahella australiensis
|
Subspecies |
|
Species Synonyms |
|
Strain |
50-1 BON, DSM 15567
|
Strain Synonyms |
|
Serovar-Biovar |
|
Culture Collection ID |
DSM 15567
|
Type Strain |
Yes
|
Exemplar DOI |
10.1601/ex.8679
|
Exemplar Name |
Mahella australiensis
|
Taxon DOI |
10.1601/tx.8679
|
Biosafety Level |
1
|
Organism Comments |
|
Cultured |
Yes
|
Culture Type |
Isolate
|
Organism Type |
Natural
|
Uncultured Type |
|
Commercial Strain |
|
Commercial Strain Comments |
|
ORGANISM TAXONOMY
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|
NCBI Taxonomy ID |
697281 |
NCBI Superkingdom |
Bacteria
|
NCBI Kingdom |
|
NCBI Phylum |
Firmicutes
|
NCBI Class |
Clostridia
|
NCBI Order |
Thermoanaerobacterales
|
NCBI Family |
Thermoanaerobacterales Family IV. Incertae Sedis
|
NCBI Genus |
Mahella
|
NCBI Species |
Mahella australiensis
|
ISOLATION CLASSIFICATION | |
Ecosystem |
Environmental
|
Ecosystem Category |
Terrestrial
|
Ecosystem Type |
Oil reservoir
|
Ecosystem Subtype |
Unclassified
|
Specific Ecosystem |
Unclassified
|
ORGANISM EXTERNAL REFERENCES | |
Strain Info ID |
|
Genbank 16S ID |
AY331143 |
GENERAL PROPERTIES | |
---|---|
Oxygen Requirement |
Anaerobe
|
Cell Shape |
Rod-shaped
|
Motility |
Motile
|
Sporulation |
Sporulating
|
Temperature Range |
Thermophile
|
Temperature Optimum |
50
|
Salinity |
|
pH |
7.5
|
Cell Diameter |
|
Cell Length |
|
Color |
|
Gram Staining |
Gram+
|
Biotic Relationships | Free living |
Symbiotic Physical Interaction |
|
Symbiotic Relationship |
|
Symbiont Name |
|
Symbiont Taxon ID |
|
Cell Arrangements |
|
Diseases |
None |
Known Habitats |
Oil fields |
Metabolisms |
|
Phenotypes |
|
Energy Sources |
Chemoorganotroph |
CYANOBACTERIA METADATA | |
Filaments |
|
Filament Type |
|
Differentiated Cells |
|
Position Of Heterocysts |
|
Cysts |
|
Mode Of Reproduction |
|
Trichome |
|
Trichome Type |
|
Carotenoids |
|
Pigments |
|
Phage Infectivity |
|
Phage Type |
|
Restriction Enzyme |
|
Toxin Production |
|
Toxin Type |
|
Secondary Metabolites |
|
Developmental Cycle |
|
Branching |
|
Gas Vesicles |
|
Gas Vesicle Type |
|
Diagnostic Inclusion Body Information |
|
Extracellular Structures |
|
Bloom Forming |
|
Pigment Type |
|
Complementary chromatic adaptation (CCA) |
|
Medium Types |
|
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