PROJECT INFORMATION
GOLD Project ID
Gp0002270  
Project Name
Sulfobacillus thermosulfidooxidans AT-1, DSM 9293  
Other Names
  
Legacy ER Project ID
12170  
Legacy GOLD ID
Gi02540  
NCBI BioProject Name Sulfobacillus thermosulfidooxidans DSM 9293
NCBI BioProject Accession PRJNA61271
NCBI Locus Tag
Sulth  
NCBI BioSample Accession SAMN00768000
PI Jonathan Eisen
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Hema Katta on 2019-03-11
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Tree of Life
Environmental
GEBA
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency U.S. Department of Energy (DOE) (USA)
Leibniz Institute (Germany)
Project Description
Sulfobacillus thermosulfidooxidans DSM 9293 genome sequencing  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI 10.46936/10.25585/60007482
JGI Portal Download Raw Sequence Data
Genome Publications Nature biotechnology 35(7):676-683 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life.

Microbiology (Reading, Engl.) Characteristics of Sulfobacillus acidophilus sp. nov. and other moderately thermophilic mineral-sulphide-oxidizing bacteria.

Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study A Genomic Encyclopedia of Bacteria and Archaea (GEBA)
Organism Sulfobacillus thermosulfidooxidans AT-1, DSM 9293
Analysis Projects Sulfobacillus thermosulfidooxidans AT-1, DSM 9293
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 5: Non-contiguous Finished
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) 454 GS FLX
Illumina GAIIx
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
50  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0002270
Organism Name
Sulfobacillus thermosulfidooxidans AT-1, DSM 9293  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Sulfobacillus  
Genus Synonyms
  
Species
Sulfobacillus thermosulfidooxidans  
Subspecies
  
Species Synonyms
  
Strain
AT-1, DSM 9293  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 9293  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.5087  
Exemplar Name
Sulfobacillus thermosulfidooxidans  
Taxon DOI
10.1601/tx.5087  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 929705
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Eubacteriales  
NCBI Family
Clostridiales Family XVII. Incertae Sedis  
NCBI Genus
Sulfobacillus  
NCBI Species
Sulfobacillus thermosulfidooxidans  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Geologic  
Ecosystem Subtype
Mine  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID X91080
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
Sporulating  
Temperature Range
Thermophile  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Mine
Metabolisms Iron oxidizer
Sulphide oxidizer
Phenotypes Acidophile
Energy Sources Mixotroph
Autotroph

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?

 

 

 

 

 

  Changing the SP Sequencing Strategy will also effect these items:

 

Do you want to continue with this Sequencing Strategy change?