PROJECT NAME
GOLD Project ID
Gp0002260  
Project Name
Methylobacterium nodulans ORS 2060  
Other Names
  
Legacy ER Project ID
12159  
Legacy GOLD ID
Gi01343, Gc00935  
NCBI BioProject Name Methylobacterium nodulans ORS 2060
NCBI BioProject ID 20477
NCBI BioProject Accession
PRJNA20477  
NCBI Locus Tag
Mnod  
NCBI BioSample Accession
SAMN00000043  
PI not listed
Added By Nikos Kyrpides on 2007-11-27 00:00:00.0
Last Modified By Auto script update processes on 2014-03-26 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Agricultural
Biotechnological
Root Nodulating Bacteria (RNB)
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Nodulates Crotalaria sp., one of the largest legume genera in Africa. The discovery that a Methylobacterium sp. nodulates came as a major breakthrough in our understanding of ecologies within the genus. It is also notable for being non&endashpigmented (the rest have pink carotenoids), capable of growth on a wide variety of multi-endashcarbon compounds including some aromatics such as benzoate, and for carrying nod genes affiliated with those in Burkholderia tuberum and more distantly, Bradyrhizobium sp.   
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Isolation
Entrez
Taxonomy
Database
  
Genome Publications Journal of bacteriology 194(17):4746-8 Complete genome sequences of six strains of the genus Methylobacterium.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies LGT in Methylobacteria Proposal # 0165-051130
Analysis Projects Methylobacterium nodulans ORS 2060
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
68  
Chromosome Count
1  
Plasmid Count
7  
ORGANISM NAME
GOLD Organism ID Go0002260
Organism Name
Methylobacterium nodulans ORS 2060  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Methylobacterium  
Genus Synonyms
  
Species
Methylobacterium nodulans  
Subspecies
  
Species Synonyms
  
Strain
ORS 2060  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
CNCM I 2342  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.8701  
Exemplar Name
Methylobacterium nodulans  
Taxon DOI
10.1601/tx.8701  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 460265
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhizobiales  
NCBI Family
Methylobacteriaceae  
NCBI Genus
Methylobacterium  
NCBI Species
Methylobacterium nodulans  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Rhizoplane  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 72740
Genbank 16S ID AF220763
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
Mutualistic  
Symbiont Name
Crotalaria  
Symbiont Taxon ID
  
Cell Arrangements Pairs
Singles
Diseases None
Known Habitats Host
Plant root
Root nodule
Metabolisms Nitrogen fixation
Phenotypes
  
Energy Sources Methylotroph

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?