PROJECT NAME
GOLD Project ID
Gp0002209  
Project Name
Xenorhabdus nematophila ATCC 19061  
Other Names
  
Legacy ER Project ID
12108  
Legacy GOLD ID
Gi00699, Gc01638  
NCBI BioProject Name Xenorhabdus nematophila ATCC 19061
NCBI BioProject ID 13400
NCBI BioProject Accession
PRJNA13400  
NCBI Locus Tag
XNC1  
NCBI BioSample Accession
  
PI Barry Goldman
Added By Nikos Kyrpides on 2007-11-27 00:00:00.0
Last Modified By Jon Bertsch on 2014-04-08 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Agricultural
Biocontrol
Insect Pathogen
Sequencing Center
  
Collaborating Institute U.S. Department of Agriculture, Agricultural Research Service, Donald Danforth Plant Science Center
Monsanto (USA)
Hiram College
Funding Agency National Science Foundation (NSF) (USA)
Project Description
A nematode symbiont that is pathogenic to insect larvae  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications PloS one 6(11):e27909 The entomopathogenic bacterial endosymbionts Xenorhabdus and Photorhabdus: convergent lifestyles from divergent genomes.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Xenorhabdus nematophila ATCC 19061
Analysis Projects Xenorhabdus nematophila ATCC 19061
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
44  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0002209
Organism Name
Xenorhabdus nematophila ATCC 19061  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Xenorhabdus  
Genus Synonyms
  
Species
Xenorhabdus nematophila  
Subspecies
  
Species Synonyms
  
Strain
ATCC 19061  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 19061  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.3343  
Exemplar Name
Xenorhabdus nematophila  
Taxon DOI
10.1601/tx.11149  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 406817
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacteriales  
NCBI Family
Enterobacteriaceae  
NCBI Genus
Xenorhabdus  
NCBI Species
Xenorhabdus nematophila  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Animal  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID X82251
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
Mutualistic  
Symbiont Name
Steinernema carpocapsae  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Host
Nematode gut
Nematode symbiont
Soil
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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