PROJECT INFORMATION
GOLD Project ID
Gp0002208  
Project Name
Xenorhabdus bovienii SS-2004  
Other Names
  
Legacy ER Project ID
12107  
Legacy GOLD ID
Gi00698, Gc01219  
NCBI BioProject Name Xenorhabdus bovienii SS-2004
NCBI BioProject ID 13399
NCBI BioProject Accession PRJNA13399
NCBI Locus Tag
XBJ1  
NCBI BioSample Accession SAMEA3138245
PI
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Alejandro Rodriguez Mojica on 2018-07-09
Project Comments
  
Project Status
Complete and Published  
Project Relevance Biocontrol
Insect Pathogen
Agricultural
Sequencing Center U.S. Department of Agriculture, Agricultural Research Service, Donald Danforth Plant Science Center
National Institute for Agricultural Research (INRA) (France)
Collaborating Institute
  
Funding Agency National Science Foundation (NSF) (USA)
Project Description
A nematode symbiont that is pathogenic to insect larvae  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information Publication
Database
  
Genome Publications PloS one 6(11):e27909 The entomopathogenic bacterial endosymbionts Xenorhabdus and Photorhabdus: convergent lifestyles from divergent genomes.
Other Publications
  
PROJECT COMPOSITION
Study Xenorhabdus bovienii SS-2004
Analysis Projects Xenorhabdus bovienii SS-2004
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
45  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0002208
Organism Name
Xenorhabdus bovienii SS-2004  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Xenorhabdus  
Genus Synonyms
  
Species
Xenorhabdus bovienii  
Subspecies
  
Species Synonyms
  
Strain
SS-2004  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 406818
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacterales  
NCBI Family
Morganellaceae  
NCBI Genus
Xenorhabdus  
NCBI Species
Xenorhabdus bovienii  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Invertebrates  
Ecosystem Type
Nematoda  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
Mutualistic  
Symbiont Name
Steinernema species  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Soil
Host
Nematode symbiont
Nematode gut
Metabolisms
  
Phenotypes Pathogen
Energy Sources Heterotroph

 

 

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