PROJECT NAME
GOLD Project ID
Gp0002108  
Project Name
Thermomicrobium roseum DSM 5159  
Other Names
  
Legacy ER Project ID
12006  
Legacy GOLD ID
Gi00735, Gc00949  
NCBI BioProject Name Thermomicrobium roseum DSM 5159
NCBI BioProject ID 32569
NCBI BioProject Accession
PRJNA32569  
NCBI Locus Tag
trd  
NCBI BioSample Accession
SAMN02603430  
PI Jonathan Eisen
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Evolution
Tree of Life
Sequencing Center J. Craig Venter Institute (JCVI) (USA)
Collaborating Institute
  
Funding Agency National Science Foundation (NSF) (USA)
Project Description
Obligate thermophile with unusual cell wall structure.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Database
  
Genome Publications PloS one 4(1):e4207 Complete genome sequence of the aerobic CO-oxidizing thermophile Thermomicrobium roseum.
Other Publications
  
PROJECT COMPOSITION
Studies Thermomicrobium roseum DSM 5159
Analysis Projects Thermomicrobium roseum DSM 5159
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
0.5Kb, 1.5-3.5Kb, 8-14Kb  
Number Of Reads
  
Read Size
  
Vector
pHOS2  
GC Percent
64  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0002108
Organism Name
Thermomicrobium roseum DSM 5159  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
CHLOROFLEXI  
Genus
Thermomicrobium  
Genus Synonyms
  
Species
Thermomicrobium roseum  
Subspecies
  
Species Synonyms
  
Strain
DSM 5159  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 5159  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.586  
Exemplar Name
Thermomicrobium roseum  
Taxon DOI
10.1601/tx.586  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 309801
NCBI Kingdom
  
NCBI Phylum
Chloroflexi  
NCBI Class
Thermomicrobia  
NCBI Order
Thermomicrobiales  
NCBI Family
Thermomicrobiaceae  
NCBI Genus
Thermomicrobium  
NCBI Species
Thermomicrobium roseum  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Thermal springs  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 159077
Genbank 16S ID M34115
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Thermophile  
Temperature Optimum
70  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Pairs
Singles
Diseases None
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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