PROJECT INFORMATION | |
---|---|
GOLD Project ID
![]() |
Gp0002100
|
Project Name
![]() |
Teredinibacter turnerae T7901
|
Other Names
![]() |
|
Legacy ER Project ID
![]() |
11998
|
Legacy GOLD ID
![]() |
Gi01476, Gc01045
|
NCBI BioProject Name | Teredinibacter turnerae T7901 |
NCBI BioProject ID
![]() |
30839 |
NCBI BioProject Accession
![]() |
PRJNA30839 |
NCBI Locus Tag
![]() |
TERTU
|
NCBI BioSample Accession
![]() |
SAMN02603454 |
PI | Dan Distel |
Added By |
Nikos Kyrpides
on 2007-11-27 |
Last Modified By |
JGI automated process
on 2014-03-26 |
Project Comments |
|
Project Status
![]() |
Complete and Published
|
Project Relevance
![]() |
Biofuels Biotechnological |
Sequencing Center
![]() |
J. Craig Venter Institute (JCVI)
(USA)
|
Collaborating Institute
![]() |
University of Maine
|
Funding Agency
![]() |
National Science Foundation (NSF)
(USA)
|
Project Description
![]() |
A dinitrogen-fixing, cellulolytic, endosymbiotic gamma-proteobacterium
|
Project Information Visibility
![]() |
Public |
PROJECT TYPE | |
Specimen
![]() |
Organism |
Nucleic Acid
![]() |
DNA |
Sequencing Strategy
![]() |
Whole Genome Sequencing
|
EXTERNAL PROJECT LINKS | |
Project Information
![]() |
Isolation |
Database
![]() |
|
Genome Publications
![]() |
PloS one
4(7):e6085
The complete genome of Teredinibacter turnerae T7901: an intracellular endosymbiont of marine wood-boring bivalves (shipworms).
|
Other Publications
![]() |
|
PROJECT COMPOSITION | |
Study |
Teredinibacter turnerae T7901 |
Organism |
Teredinibacter turnerae T7901 |
Analysis Projects |
Teredinibacter turnerae T7901 |
Number of Analysis Projects |
1 |
Number of DAPs |
0
|
SEQUENCING INFORMATION | |
---|---|
Sequencing Status
![]() |
Complete |
Sequencing Quality (MIGS-31) |
Level 6: Finished |
Finishing Goal
![]() |
|
Sequencing Comments
![]() |
|
Sequencing Technology
(MIGS-29)
![]() |
Sanger 454 GS20 |
Library Method
(MIGS-28)
![]() |
3-4Kb, 8-10Kb, 33-39Kb
|
Number Of Reads
![]() |
6144 Sanger reads, 158697 454-GS20 reads
|
Read Size
![]() |
|
Vector
![]() |
|
GC Percent |
51
|
Chromosome Count |
1
|
Plasmid Count |
0
|
ORGANISM NAME | |
---|---|
GOLD Organism ID |
Go0002100 |
Organism Name |
Teredinibacter turnerae T7901
|
Other names (alias, synonyms, short names, common names) |
|
Organism Domain |
BACTERIAL
|
Phylogeny |
PROTEOBACTERIA-GAMMA
|
Genus |
Teredinibacter
|
Genus Synonyms |
|
Species |
Teredinibacter turnerae
|
Subspecies |
|
Species Synonyms |
|
Strain |
T7901
|
Strain Synonyms |
|
Serovar-Biovar |
|
Culture Collection ID |
|
Type Strain |
No
|
Exemplar DOI |
|
Exemplar Name |
|
Taxon DOI |
|
Biosafety Level |
1
|
Organism Comments |
|
Cultured |
Yes
|
Culture Type |
Isolate
|
Organism Type |
Natural
|
Uncultured Type |
|
Commercial Strain |
|
Commercial Strain Comments |
|
ORGANISM TAXONOMY
![]() |
|
NCBI Taxonomy ID |
377629 |
NCBI Superkingdom |
Bacteria
|
NCBI Kingdom |
|
NCBI Phylum |
Proteobacteria
|
NCBI Class |
Gammaproteobacteria
|
NCBI Order |
Cellvibrionales
|
NCBI Family |
Cellvibrionaceae
|
NCBI Genus |
Teredinibacter
|
NCBI Species |
Teredinibacter turnerae
|
ISOLATION CLASSIFICATION | |
Ecosystem |
Host-associated
|
Ecosystem Category |
Animal
|
Ecosystem Type |
Unclassified
|
Ecosystem Subtype |
Unclassified
|
Specific Ecosystem |
Unclassified
|
ORGANISM EXTERNAL REFERENCES | |
Strain Info ID |
|
Genbank 16S ID |
AY028398 |
GENERAL PROPERTIES | |
---|---|
Oxygen Requirement |
|
Cell Shape |
Rod-shaped
|
Motility |
Motile
|
Sporulation |
|
Temperature Range |
Mesophile
|
Temperature Optimum |
|
Salinity |
|
pH |
|
Cell Diameter |
|
Cell Length |
|
Color |
|
Gram Staining |
Gram-
|
Biotic Relationships | Symbiotic |
Symbiotic Physical Interaction |
|
Symbiotic Relationship |
|
Symbiont Name |
Lyrodus pedicellatus
|
Symbiont Taxon ID |
|
Cell Arrangements |
|
Diseases |
None |
Known Habitats |
Host Endosymbiont |
Metabolisms |
Cellulose degrader Dinitrogen-fixing |
Phenotypes |
|
Energy Sources |
Chemoheterotroph |
You are going to add the following user to your project, biosample and study.
Contact Name/Email: Do you want to continue?
You are going to remove permissions for the following user to your project, biosample and study.
Contact Name/Email: Do you want to continue?
Changing the SP visibility will also change visibility on the following items:
Do you want to continue with this visibility change?
Checking that this Sequencing Project can be made private:
Do you want to continue with this visibility change?