PROJECT NAME
GOLD Project ID
Gp0002100  
Project Name
Teredinibacter turnerae T7901  
Other Names
  
Legacy ER Project ID
11998  
Legacy GOLD ID
Gi01476, Gc01045  
NCBI BioProject Name Teredinibacter turnerae T7901
NCBI BioProject ID 30839
NCBI BioProject Accession
PRJNA30839  
NCBI Locus Tag
TERTU  
NCBI BioSample Accession
SAMN02603454  
PI Daniel Distel
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biofuels
Biotechnological
Sequencing Center J. Craig Venter Institute (JCVI) (USA)
Collaborating Institute University of Maine
Funding Agency National Science Foundation (NSF) (USA)
Project Description
A dinitrogen-fixing, cellulolytic, endosymbiotic gamma-proteobacterium  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Isolation
Taxonomy
Database
  
Genome Publications PloS one 4(7):e6085 The complete genome of Teredinibacter turnerae T7901: an intracellular endosymbiont of marine wood-boring bivalves (shipworms).
Other Publications
  
PROJECT COMPOSITION
Studies Teredinibacter turnerae T7901
Analysis Projects Teredinibacter turnerae T7901
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS20
Sanger
Library Method (MIGS-28)
3-4Kb, 8-10Kb, 33-39Kb  
Number Of Reads
6144 Sanger reads, 158697 454-GS20 reads  
Read Size
  
Vector
  
GC Percent
51  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0002100
Organism Name
Teredinibacter turnerae T7901  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Teredinibacter  
Genus Synonyms
  
Species
Teredinibacter turnerae  
Subspecies
  
Species Synonyms
  
Strain
T7901  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
No  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 377629
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Cellvibrionales  
NCBI Family
Cellvibrionaceae  
NCBI Genus
Teredinibacter  
NCBI Species
Teredinibacter turnerae  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Animal  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AY028398
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 1
Term Symbiotic
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
Lyrodus pedicellatus  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Endosymbiont
Host
Metabolisms Cellulose degrader
Dinitrogen-fixing
Phenotypes
  
Energy Sources Chemoheterotroph

 

 

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