PROJECT NAME
GOLD Project ID
Gp0002073  
Project Name
Streptococcus suis BM407  
Other Names
  
Legacy ER Project ID
11967  
Legacy GOLD ID
Gi01370, Gc01062  
NCBI BioProject Name Streptococcus suis BM407
NCBI BioProject ID 32237
NCBI BioProject Accession
PRJEA32237  
NCBI Locus Tag
SSUBM407  
NCBI BioSample Accession
SAMEA2272697  
PI
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Animal Pathogen
Human Pathogen
Medical
Swine Pathogen
Sequencing Center Wellcome Trust Sanger Institute (United Kingdom)
Collaborating Institute University of Cambridge (United Kingdom)
University of Oxford (United Kingdom)
University of Montreal
Funding Agency Wellcome Trust Sanger Institute (United Kingdom)
Project Description
Human clinical isolate  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Wikipedia
Taxonomy
Database
  
Genome Publications PloS one 4(7):e6072 Rapid evolution of virulence and drug resistance in the emerging zoonotic pathogen Streptococcus suis.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Streptococcus suis BM407
Analysis Projects Streptococcus suis BM407
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS20
Sanger
Solexa
Library Method (MIGS-28)
2.8?3.3 kb,3.0?3.3 kb, BAc libraries 10?25 kb and 12?15 kb  
Number Of Reads
223282 454, 1769043 lllumina  
Read Size
  
Vector
pUC18, pMAQ1b_SmaI, pBACehr, pBACe3.6  
GC Percent
41  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0002073
Organism Name
Streptococcus suis BM407  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Streptococcus  
Genus Synonyms
  
Species
Streptococcus suis  
Subspecies
  
Species Synonyms
  
Strain
BM407  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 568814
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Streptococcaceae  
NCBI Genus
Streptococcus  
NCBI Species
Streptococcus suis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Chains
Pairs
Diseases Arthritis
Endocarditis
Meningitis
Septicemia
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?