PROJECT NAME
GOLD Project ID
Gp0002058  
Project Name
Streptococcus pneumoniae OXC141 (ST 180, serotype 3)  
Other Names
  
Legacy ER Project ID
11952  
Legacy GOLD ID
Gi01089, Gc01495  
NCBI BioProject Name Streptococcus pneumoniae OXC141
NCBI BioProject ID 50733
NCBI BioProject Accession
PRJNA50733  
NCBI Locus Tag
SPNOXC  
NCBI BioSample Accession
  
PI
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Human Pathogen
Medical
Sequencing Center Wellcome Trust Sanger Institute (United Kingdom)
Collaborating Institute University of Leicester
University of Glasgow
Funding Agency Beowulf Genomics (United Kingdom)
Project Description
Streptococcus pneumoniae OXC141 genome sequencing project.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information MLST
Disease
Database
  
Genome Publications Genome biology 11(10):R107 Structure and dynamics of the pan-genome of Streptococcus pneumoniae and closely related species.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Streptococcus pneumoniae OXC141 (ST 180, serotype 3)
Analysis Projects Streptococcus pneumoniae OXC141 (ST 180, serotype 3)
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
40  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0002058
Organism Name
Streptococcus pneumoniae OXC141 (ST 180, serotype 3)  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Streptococcus  
Genus Synonyms
  
Species
Streptococcus pneumoniae  
Subspecies
  
Species Synonyms
  
Strain
OXC141 (ST 180, serotype 3)  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 869215
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Lactobacillales  
NCBI Family
Streptococcaceae  
NCBI Genus
Streptococcus  
NCBI Species
Streptococcus pneumoniae  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Chains
Pairs
Diseases Pneumonia
Known Habitats Host
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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