PROJECT NAME
GOLD Project ID
Gp0002036  
Project Name
Stenotrophomonas maltophilia K279a  
Other Names
  
Legacy ER Project ID
11931  
Legacy GOLD ID
Gi00603, Gc00785  
NCBI BioProject Name Stenotrophomonas maltophilia K279a
NCBI BioProject ID 30351
NCBI BioProject Accession
PRJNA30351  
NCBI Locus Tag
Smlt  
NCBI BioSample Accession
SAMEA1705934  
PI Parkhill
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Human Pathogen
Medical
Sequencing Center Wellcome Trust Sanger Institute (United Kingdom)
Collaborating Institute University of Bristol (United Kingdom)
Funding Agency
  
Project Description
Clinical isolate  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Database
  
Genome Publications Genome biology 9(4):R74 The complete genome, comparative and functional analysis of Stenotrophomonas maltophilia reveals an organism heavily shielded by drug resistance determinants.
Other Publications
  
Isolation Publications
  
PROJECT COMPOSITION
Studies Stenotrophomonas maltophilia K279a
Analysis Projects Stenotrophomonas maltophilia K279a
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
1.4-2.0 kb, 2.0-2.8 kb, 3.0-3.3 kb, 5.5-6.0 kb, 9-10 kb,10-12 kb, 5-18 and 20-25 kb   
Number Of Reads
75528  
Read Size
  
Vector
pUC19, pMAQ1b and pBACe3.6  
GC Percent
66  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0002036
Organism Name
Stenotrophomonas maltophilia K279a  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Stenotrophomonas  
Genus Synonyms
  
Species
Stenotrophomonas maltophilia  
Subspecies
  
Species Synonyms
  
Strain
K279a  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 522373
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Xanthomonadales  
NCBI Family
Xanthomonadaceae  
NCBI Genus
Stenotrophomonas  
NCBI Species
Stenotrophomonas maltophilia  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Circulatory system  
Ecosystem Subtype
Blood  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases Bacteremia
Nosocomial infection
Opportunistic infection
Pulmonary infection
Known Habitats Fresh water
Host
Plants
Soil
Metabolisms
  
Phenotypes Nonfermentative
Pathogen
Energy Sources
  

 

 

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