PROJECT NAME
GOLD Project ID
Gp0001995  
Project Name
Haliscomenobacter hydrossis O, DSM 1100  
Other Names
  
Legacy ER Project ID
15207  
Legacy GOLD ID
Gi04678, Gc01752  
NCBI BioProject Name Haliscomenobacter hydrossis DSM 1100
NCBI BioProject ID 48289
NCBI BioProject Accession
PRJNA48289  
NCBI Locus Tag
Halhy  
NCBI BioSample Accession
SAMN00713614  
PI Jonathan Eisen
Added By Nikos Kyrpides on 2009-08-07 00:00:00.0
Last Modified By Jon Bertsch on 2014-04-08 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance GEBA
Tree of Life
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute Leibniz Institute (Germany)
Funding Agency Leibniz Institute (Germany)
U.S. Department of Energy (DOE) (USA)
Project Description
Haliscomenobacter hydrossis DSM 1100 genome sequencing project.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information GEBA
Database
  
Genome Publications Standards in genomic sciences 4(3):352-60 Complete genome sequence of Haliscomenobacter hydrossis type strain (O).
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies A Genomic Encyclopedia of Bacteria and Archaea (GEBA)
Analysis Projects Haliscomenobacter hydrossis O, DSM 1100
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX-Titanium
Illumina GAii
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
47  
Chromosome Count
1  
Plasmid Count
3  
ORGANISM NAME
GOLD Organism ID Go0001995
Organism Name
Haliscomenobacter hydrossis O, DSM 1100  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Haliscomenobacter  
Genus Synonyms
  
Species
Haliscomenobacter hydrossis  
Subspecies
  
Species Synonyms
  
Strain
O, DSM 1100  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 1100  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.8242  
Exemplar Name
Haliscomenobacter hydrossis  
Taxon DOI
10.1601/tx.8242  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 760192
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Chitinophagia  
NCBI Order
Chitinophagales  
NCBI Family
Saprospiraceae  
NCBI Genus
Haliscomenobacter  
NCBI Species
Haliscomenobacter hydrossis  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Wastewater  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID M58790
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
26  
Salinity
  
pH
7.5  
Cell Diameter
0.35 ? 0.45 um  
Cell Length
3 - 5 um  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Chains
Diseases None
Known Habitats Sludge
Metabolisms
  
Phenotypes
  
Energy Sources Chemoorganotroph
CYANOBACTERIA METADATA
Filaments
  
Filament Type
  
Differentiated Cells
  
Position Of Heterocysts
  
Cysts
  
Mode Of Reproduction
  
Trichome
  
Trichome Type
  
Carotenoids
  
Pigments
  
Phage Infectivity
  
Phage Type
  
Restriction Enzyme
  
Toxin Production
  
Toxin Type
  
Secondary Metabolites
  
Developmental Cycle
  
Branching
  
Gas Vesicles
  
Gas Vesicle Type
  
Diagnostic Inclusion Body Information
  
Extracellular Structures
  
Bloom Forming
  
Pigment Type
  
Complementary chromatic adaptation (CCA)
  
Medium Types
  

 

 

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