PROJECT NAME
GOLD Project ID
Gp0001970  
Project Name
Methylosinus trichosporium OB3b  
Other Names
  
Legacy ER Project ID
11872  
Legacy GOLD ID
Gi02103  
NCBI BioProject Name Methylosinus trichosporium OB3b
NCBI BioProject ID 41067
NCBI BioProject Accession
PRJNA41067  
NCBI Locus Tag
Mettr  
NCBI BioSample Accession
SAMN02441795  
PI Lisa Stein
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-08-18
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Bioremediation
Biotechnological
Environmental
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency National Center for Biotechnology Information (NCBI) (USA)
U.S. Department of Energy (DOE) (USA)
Project Description
Methylosinus trichosporium OB3b genome sequencing project  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Information
Database
  
Genome Publications Journal of bacteriology 192(24):6497-8 Genome sequence of the obligate methanotroph Methylosinus trichosporium strain OB3b.
Other Publications
  
PROJECT COMPOSITION
Studies CSP_786864, Methanotrophic Bacteria
Analysis Projects Methylosinus trichosporium OB3b
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 5: Non-contiguous Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS-FLX
Illumina GAii
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
66  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0001970
Organism Name
Methylosinus trichosporium OB3b  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Methylosinus  
Genus Synonyms
  
Species
Methylosinus trichosporium  
Subspecies
  
Species Synonyms
  
Strain
OB3b  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 35070  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.1438  
Exemplar Name
Methylosinus trichosporium  
Taxon DOI
10.1601/tx.1438  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 595536
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhizobiales  
NCBI Family
Methylocystaceae  
NCBI Genus
Methylosinus  
NCBI Species
Methylosinus trichosporium  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID M29024
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Soil
Metabolisms Methane oxidation
Pollutant degrader
TCE degrader
Phenotypes
  
Energy Sources Methanotroph

 

 

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