PROJECT NAME
GOLD Project ID
Gp0001962  
Project Name
Dethiobacter alkaliphilus AHT1  
Other Names
  
Legacy ER Project ID
11863  
Legacy GOLD ID
Gi02093  
NCBI BioProject Name Dethiobacter alkaliphilus AHT 1
NCBI BioProject ID 30985
NCBI BioProject Accession PRJNA30985
NCBI Locus Tag
Deal  
NCBI BioSample Accession SAMN02441789
PI Gerard Muyzer
Added By Nikos Kyrpides on 2007-11-27
Last Modified By JGI automated process on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance Biotechnological
Bioremediation
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Mongolian soda lake bacterium  
Project Information Visibility Public
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Taxonomy
Entrez
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study CSP_788492, Haloalkaliphilic sulfate-, thiosulfate- and sulfur-reducing bacteria
Analysis Projects Dethiobacter alkaliphilus AHT1
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
48  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0001962
Organism Name
Dethiobacter alkaliphilus AHT1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Dethiobacter  
Genus Synonyms
  
Species
Dethiobacter alkaliphilus  
Subspecies
  
Species Synonyms
  
Strain
AHT1  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 19026  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.13712  
Exemplar Name
Dethiobacter alkaliphilus  
Taxon DOI
10.1601/tx.13712  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 555088
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Clostridia  
NCBI Order
Clostridiales  
NCBI Family
Syntrophomonadaceae  
NCBI Genus
Dethiobacter  
NCBI Species
Dethiobacter alkaliphilus  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Non-marine Saline and Alkaline  
Ecosystem Subtype
Alkaline  
Specific Ecosystem
Sediment  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID EF422412
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Sporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
Halophile  
pH
10  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Sediment
Aquatic
Soda lakes
Fresh water
Metabolisms
  
Phenotypes Alkaliphile
Energy Sources
  

 

 

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