PROJECT NAME
GOLD Project ID
Gp0001914  
Project Name
Rhodomicrobium vannielii ATCC 17100  
Other Names
  
Legacy ER Project ID
11813  
Legacy GOLD ID
Gi02056, Gc01653  
NCBI BioProject Name Rhodomicrobium vannielii ATCC 17100
NCBI BioProject ID 38253
NCBI BioProject Accession
PRJNA38253  
NCBI Locus Tag
Rvan  
NCBI BioSample Accession
SAMN00007427  
PI Yves Brun
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Rhodomicrobium vannielii ATCC 17100 genome sequencing  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Studies CSP_787681, Stalked bacteria
Analysis Projects Rhodomicrobium vannielii ATCC 17100
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
62  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0001914
Organism Name
Rhodomicrobium vannielii ATCC 17100  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Rhodomicrobium  
Genus Synonyms
  
Species
Rhodomicrobium vannielii  
Subspecies
  
Species Synonyms
  
Strain
ATCC 17100  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC 17100  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.1565  
Exemplar Name
Rhodomicrobium vannielii  
Taxon DOI
10.1601/tx.1565  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 648757
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhizobiales  
NCBI Family
Hyphomicrobiaceae  
NCBI Genus
Rhodomicrobium  
NCBI Species
Rhodomicrobium vannielii  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats
  
Metabolisms Nitrogen fixation
Phenotypes
  
Energy Sources Photoheterotroph

 

 

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