PROJECT INFORMATION
GOLD Project ID
Gp0001818  
Project Name
Rhodococcus opacus B4  
Other Names
  
Legacy ER Project ID
11718  
Legacy GOLD ID
Gi01302, Gc00982  
NCBI BioProject Name Rhodococcus opacus B4
NCBI BioProject ID 34839
NCBI BioProject Accession PRJDA34839
NCBI Locus Tag
ROP  
NCBI BioSample Accession SAMD00060964
PI Fujita N
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Alejandro Rodriguez Mojica on 2018-07-19
Project Comments
  
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center National Institute of Technology and Evaluation (Japan)
Collaborating Institute
  
Funding Agency
  
Project Description
Rhodococcus opacus B4 genome sequencing project  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Journal of bioscience and bioengineering 99(4):408-14 Development of a genetic transformation system for benzene-tolerant Rhodococcus opacus strains.
Other Publications
  
PROJECT COMPOSITION
Study Rhodococcus opacus B4
Analysis Projects Rhodococcus opacus B4
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
68  
Chromosome Count
1  
Plasmid Count
5  
ORGANISM NAME
GOLD Organism ID Go0001818
Organism Name
Rhodococcus opacus B4  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Rhodococcus  
Genus Synonyms
  
Species
Rhodococcus opacus  
Subspecies
  
Species Synonyms
  
Strain
B4  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 632772
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Corynebacteriales  
NCBI Family
Nocardiaceae  
NCBI Genus
Rhodococcus  
NCBI Species
Rhodococcus opacus  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Filaments
Diseases None
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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