PROJECT NAME
GOLD Project ID
Gp0001806  
Project Name
Cupriavidus taiwanensis LMG 19424  
Other Names
  
Legacy ER Project ID
11707  
Legacy GOLD ID
Gi00956, Gc00754  
NCBI BioProject Name Cupriavidus taiwanensis
NCBI BioProject ID 15733
NCBI BioProject Accession
PRJNA15733  
NCBI Locus Tag
RALTA  
NCBI BioSample Accession
SAMEA3138280  
PI Masson-Boivin C
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Agricultural
Root Nodulating Bacteria (RNB)
Sequencing Center CEA Genoscope (France)
Collaborating Institute
  
Funding Agency
  
Project Description
Cupriavidus taiwanensis LMG19424 was isolated from the root nodule of the legume Mimosa pudica in Taiwan and will be used for comparative genomics.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Isolation
Database
  
Genome Publications Genome research 18(9):1472-83 Genome sequence of the beta-rhizobium Cupriavidus taiwanensis and comparative genomics of rhizobia.
Other Publications
  
PROJECT COMPOSITION
Studies Cupriavidus taiwanensis LMG 19424
Analysis Projects Cupriavidus taiwanensis LMG 19424
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
3, 10kb inserts, BAC libraries  
Number Of Reads
126328  
Read Size
  
Vector
pNav, pCNS, pBeloBac11  
GC Percent
67  
Chromosome Count
2  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0001806
Organism Name
Cupriavidus taiwanensis LMG 19424  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-BETA  
Genus
Cupriavidus  
Genus Synonyms
Ralstonia  
Species
Cupriavidus taiwanensis  
Subspecies
  
Species Synonyms
  
Strain
LMG 19424  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
LMG 19424  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.1685  
Exemplar Name
Cupriavidus taiwanensis  
Taxon DOI
10.1601/tx.8564  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 164546
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Betaproteobacteria  
NCBI Order
Burkholderiales  
NCBI Family
Burkholderiaceae  
NCBI Genus
Cupriavidus  
NCBI Species
Cupriavidus taiwanensis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Rhizoplane  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 49173
Genbank 16S ID AF300324
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 1
Term Symbiotic
Symbiotic Physical Interaction
  
Symbiotic Relationship
Mutualistic  
Symbiont Name
Mimosa pudica  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Host
Root nodule
Metabolisms Nitrogen fixation
Phenotypes Symbiotic
Energy Sources Heterotroph

 

 

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