PROJECT NAME
GOLD Project ID
Gp0001799  
Project Name
Pseudomonas aeruginosa LESB58  
Other Names
  
Legacy ER Project ID
11698  
Legacy GOLD ID
Gi01253, Gc00915  
NCBI BioProject Name Pseudomonas aeruginosa LESB58
NCBI BioProject ID 31101
NCBI BioProject Accession
PRJEA31101  
NCBI Locus Tag
PLES  
NCBI BioSample Accession
SAMEA1705916  
PI Parkhill
Added By Nikos Kyrpides on 2007-11-27 00:00:00.0
Last Modified By Auto script update processes on 2014-03-26 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Animal Pathogen
Human Pathogen
Medical
Sequencing Center Wellcome Trust Sanger Institute (United Kingdom)
Collaborating Institute University of British Columbia (Canada)
University of Liverpool (United Kingdom)
Simon Fraser University
Funding Agency Wellcome Trust Sanger Institute (United Kingdom)
Project Description
Hypervirulent human isolate  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Wikipedia
Taxonomy
Entrez
Database
  
Genome Publications Genome research 19(1):23-Dec Newly introduced genomic prophage islands are critical determinants of in vivo competitiveness in the Liverpool Epidemic Strain of Pseudomonas aeruginosa.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Pseudomonas aeruginosa LESB58
Analysis Projects Pseudomonas aeruginosa LESB58
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
2¿3 kb, 3¿12 kb, 5¿18 kb  
Number Of Reads
  
Read Size
  
Vector
pOTW12, pMAQSac, pBACehr  
GC Percent
66  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0001799
Organism Name
Pseudomonas aeruginosa LESB58  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Pseudomonas  
Genus Synonyms
  
Species
Pseudomonas aeruginosa  
Subspecies
  
Species Synonyms
  
Strain
LESB58  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 557722
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Pseudomonadales  
NCBI Family
Pseudomonadaceae  
NCBI Genus
Pseudomonas  
NCBI Species
Pseudomonas aeruginosa  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases Cystic Fibrosis
Known Habitats Fresh water
Host
Soil
Metabolisms
  
Phenotypes Pathogen
Energy Sources Heterotroph

 

 

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