PROJECT INFORMATION
GOLD Project ID
Gp0001790  
Project Name
Prosthecochloris aestuarii SK413, DSM 271  
Other Names
  
Legacy ER Project ID
11688  
Legacy GOLD ID
Gi00485, Gc00835  
NCBI BioProject Name Prosthecochloris aestuarii DSM 271
NCBI BioProject ID 12749
NCBI BioProject Accession PRJNA12749
NCBI Locus Tag
Paes  
NCBI BioSample Accession SAMN02598281
PI Donald Bryant
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Jon Bertsch on 2014-04-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
This is the type strain for a biofilm-forming green sulfur bacteria.  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Entrez
Taxonomy
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Study Chlorobia, 8 species
Analysis Projects Prosthecochloris aestuarii SK413, DSM 271
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
50  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0001790
Organism Name
Prosthecochloris aestuarii SK413, DSM 271  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
CHLOROBI  
Genus
Prosthecochloris  
Genus Synonyms
  
Species
Prosthecochloris aestuarii  
Subspecies
  
Species Synonyms
  
Strain
SK413, DSM 271  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 271  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.806  
Exemplar Name
Prosthecochloris aestuarii  
Taxon DOI
10.1601/tx.806  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 290512
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Chlorobi  
NCBI Class
Chlorobia  
NCBI Order
Chlorobiales  
NCBI Family
Chlorobiaceae  
NCBI Genus
Prosthecochloris  
NCBI Species
Prosthecochloris aestuarii  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 156557
Genbank 16S ID Y07837
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
30  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Fresh water
Metabolisms Nitrogen fixation
Phenotypes Green sulfur
Energy Sources Photosynthetic

 

 

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