PROJECT INFORMATION
GOLD Project ID
Gp0001784  
Project Name
Prochloron didemni P1-Palau  
Other Names
  
Legacy ER Project ID
11683  
Legacy GOLD ID
Gi00723  
NCBI BioProject Name Prochloron didemni P1-Palau
NCBI BioProject Accession PRJNA13452
NCBI Locus Tag
  
NCBI BioSample Accession
PI
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Nikos Kyrpides on 2012-10-11
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Biotechnological
Sequencing Center J. Craig Venter Institute
Collaborating Institute University of Utah (USA)
University of California, San Diego (USA)
Funding Agency National Science Foundation (NSF) (USA)
Project Description
Prochloron didemni produces patellamides, small cyclic peptides, which may be useful in treating cancer. The genome sequence of this organism will provide information on the production and regulation of these compounds.   
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Prochloron didemni
Organism Prochloron didemni P1-Palau
Analysis Projects Prochloron didemni P1-Palau
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0001784
Organism Name
Prochloron didemni P1-Palau  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
CYANOBACTERIA  
Genus
Prochloron  
Genus Synonyms
  
Species
Prochloron didemni  
Subspecies
  
Species Synonyms
  
Strain
P1-Palau  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 910450
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Cyanobacteria  
NCBI Class
  
NCBI Order
Synechococcales  
NCBI Family
Prochloraceae  
NCBI Genus
Prochloron  
NCBI Species
Prochloron didemni  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
Lissoclinum patella  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases None
Known Habitats Obligate symbiont
Fresh water
Metabolisms Patellamides producer
Phenotypes
  
Energy Sources Photosynthetic

 

 

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